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WORLD INTELLECTUAL PROPERTY ORGANIZATION 

International Bureau 



PCT 

INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) 



(51) International Patent Classification 6 ; 




(11) International Publication Number: 


WO 99/32436 


C07C 275/24, C07D 213/02, 333/02, 
A61K 31/17, 31/38, 31/44 


Al 


(43) International Publication Date: 


1 July 1999 (01.07.99) 



(21) International Application Number: PCT/US98/26081 

(22) International Filing Date: 22 December 1998 (22.12.98) 



(30) Priority Data: 

08/996,344 



22 December 1997 (22.12.97) US 



(71) Applicant: BAYER CORPORATION [US/US]; 100 Bayer 

Road, Pittsburg, PA 15205 (US). 

(72) Inventors: MILLER, Scott; 220 Lindenwood Drive, Exton, 

PA 19341 (US). OSTERHOUT, Martin; 3217 Quiet Mill 
Road, Raleigh, NC 27612 (US). DUMAS, Jacques; 821 
Beechwood Road, Orange, CT 06477 (US). KHIRE, 
Uday; 101 Tanglewood Drive, Hamden, CT 06518 (US). 
LOWINGER, Timothy, Bruno; 5-7, #1203 Chitose-cho, 
Nishinomiya, Hyogo 662-0046 (JP). RIEDL, Bernd; 13 
Cedrus Court, Branford, CT 06405 (US). SCOTT, William, 
J.; 210 Saddle Hill Drive, Guilford, CT 06437 (US). 
SMITH, Roger, A.; 65 Winterhill Road, Madison, CT 06443 
(US). WOOD, Jill, E.; 72 Pickwick Road, Hamden, CT 
06517 (US). GUNN, David; 40 Wood Street, Hamden, 
CT 06517 (US). RODRIGUEZ, Mareli; 281 Durham Road, 
Guilford, CT 06437 (US). WANG, Ming; 112 Hoyt Street 
#4F, Stamford, CT 06905 (US). 



(74) Agents: TRA VERSO, Richard, J. et al.; Millen, White, Zelano 
& Branigan, P.C., Arlington Courthouse Plaza 1, Suite 1400, 
2200 Clarendon Boulevard, Arlington, VA 22201 (US). 



(81) Designated States: AL, AM, AT, AU, AZ, BA, BB, BG, BR, 
BY, CA, CH, CN, CU, CZ, DE, DK, EE, ES, FI, GB, GD, 
GE, GH, GM, HR, HU, ID, IL, IN, IS, JP, KE, KG, KP, 
KR, KZ, LC, LK, LR, LS, LT, LU, LV, MD, MG, MK, 
MN, MW, MX, NO, NZ, PL, PT, RO, RU, SD, SE, SG, 
SI, SK, SL, TJ, TM, TR, TT, UA, UG, UZ, VN, YU, ZW, 
ARIPO patent (GH, GM, KE, LS, MW, SD, SZ, UG, ZW), 
Eurasian patent (AM, AZ, BY, KG, KZ, MD, RU, TJ, TM), 
European patent (AT, BE, CH, CY, DE, DK, ES, FI, FR, 
GB, GR, IE, IT, LU, MC, NL, PT, SE), OAPI patent (BF, 
BJ, CF, CG, CI, CM, GA, GN, GW, ML, MR, NE, SN, 
TD, TG). 



Published 

With international search report. 



(54) Title: INHIBITION OF RAF KINASE USING SYMMETRICAL AND UNSYMMETRICAL SUBSTITUTED DIPHENYL UREAS 
(57) Abstract 

This invention relates to the use of a group of aryl ureas in treating raf mediated diseases, and pharmaceutical compositions for use 
in such therapy. 



FOR THE PURPOSES OF INFORMATION ONLY 



Codes used to identify States party to the PCT on the front pages of pamphlets publishing international applications under the PCT. 



AL 


Albania 


ES 


Spain 


LS 


Lesotho 


SI 


Slovenia 


AM 


Armenia 


FI 


Finland 


LT 


Lithuania 


SK 


Slovakia 


AT 


Austria 


FR 


France 


LU 


Luxembourg 


SN 


Senegal 


AU 


Australia 


GA 


Gabon 


LV 


Latvia 


sz 


Swaziland 


AZ 


Azerbaijan 


GB 


United Kingdom 


MC 


Monaco 


TD 


Chad 


BA 


Bosnia and Herzegovina 


GE 


Georgia 


MD 


Republic of Moldova 


TG 


Togo 


BB 


Barbados 


GH 


Ghana 


MG 


Madagascar 


TJ 


Tajikistan 


BE 


Belgium 


GN 


Guinea 


MK 


The former Yugoslav 


TM 


Turkmenistan 


BF 


Burkina Faso 


GR 


Greece 




Republic of Macedonia 


TR 


Turkey 


BG 


Bulgaria 


HU 


Hungary 


ML 


Mali 


TT 


Trinidad and Tobago 


BJ 


Benin 


IE 


Ireland 


MN 


Mongolia 


UA 


Ukraine 


BR 


Brazil 


IL 


Israel 


MR 


Mauritania 


UG 


Uganda 


BY 


Belarus 


IS 


Iceland 


MW 


Malawi 


us 


United States of America 


CA 


Canada 


IT 


Italy 


MX 


Mexico 


uz 


Uzbekistan 


CF 


Central African Republic 


JP 


Japan 


NE 


Niger 


VN 


Viet Nam 


CG 


Congo 


KE 


Kenya 


NL 


Netherlands 


YU 


Yugoslavia 


CH 


Switzerland 


KG 


Kyrgyzstan 


NO 


Norway 


ZW 


Zimbabwe 


CI 


Cdte d'lvoire 


KP 


Democratic People's 


NZ 


New Zealand 






CM 


Cameroon 




Republic of Korea 


PL 


Poland 






CN 


China 


KR 


Republic of Korea 


PT 


Portugal 






cu 


Cuba 


KZ 


Kazakstan 


RO 


Romania 






cz 


Czech Republic 


LC 


Saint Lucia 


RU 


Russian Federation 






DE 


Germany 


LI 


Liechtenstein 


SD 


Sudan 






DK 


Denmark 


LK 


Sri Lanka 


SE 


Sweden 






EE 


Estonia 


LR 


Liberia 


SG 


Singapore 







WO 99/32436 



PCT/US98/26081 



INHIBITION OF RAF KINASE USING SYMMETRICAL AND 
UNSYMMETRICAL SUBSTITUTED DIPHENYL UREAS 

Field of the Invention 

This invention relates to the use of a group of aryl ureas in treating raf mediated 
diseases, and pharmaceutical compositions for use in such therapy. 

Background of the Invention 

The p21 ras oncogene is a major contributor to the development and progression of 
human solid cancers and is mutated in 30% of all human cancers (Bolton et al. Ann. 
Rep. Med. Chem. 1994, 29, 165-74; Bos. Cancer Res. 1989, 49, 4682-9). In its 
normal, unmutated form, the ras protein is a key element of the signal transduction 
cascade directed by growth factor receptors in almost all tissues (Avruch et al. Trends 
Biochem. Set 1994, 19, 279-83). Biochemically, ras is a guanine nucleotide binding 
protein, and cycling between a GTP-bound activated and a GDP-bound resting form is 
strictly controlled by ras' endogenous GTPase activity and other regulatory proteins. 
In the ras mutants in cancer cells, the endogenous GTPase activity is alleviated and, 
therefore, the protein delivers constitutive growth signals to downstream effectors 
such as the enzyme raf kinase. This leads to the cancerous growth of the cells which 
carry these mutants (Magnuson et al. Semin. Cancer Biol 1994, 5, 247-53). It has 
been shown that inhibiting the effect of active ras by inhibiting the raf kinase 
signaling pathway by administration of deactivating antibodies to raf kinase or by co- 
expression of dominant negative raf kinase or dominant negative MEK, the substrate 
of raf kinase, leads to the reversion of transformed cells to the normal growth 
phenotype (see: Daum et al. Trends Biochem. Set 1994, 79, 474-80; Fridman et al. J. 
Biol Chem. 1994, 269, 30105-8. Kolch et al. {Nature 1991, 349, 426-28) have further 
indicated that inhibition of raf expression by antisense RNA blocks cell proliferation 



WO 99/32436 



PCT/US98/26081 



in membrane-associated oncogenes. Similarly, inhibition of raf kinase (by antisense 
oligodeoxynucleotides) has been correlated in vitro and in vivo with inhibition of the 
growth of a variety of human tumor types (Monia et al., Nat Med. 1996, 2, 668-75). 

5 Summary of the Invention 

The present invention provides compounds which are inhibitors of the enzyme raf 
kinase. Since the enzyme is a downstream effector of p21 ras , the instant inhibitors are 
useful in pharmaceutical compositions for human or veterinary use where inhibition 
of the raf kinase pathway is indicated, e.g., in the treatment of tumors and/or 

10 cancerous cell growth mediated by raf kinase. In particular, the compounds are useful 
in the treatment of human or animal cancers, e.g., murine, solid cancers, since the 
progression of these cancers is dependent upon the ras protein signal transduction 
cascade and therefore susceptible to treatment by interruption of the cascade, i.e., by 
inhibiting raf kinase. Accordingly, the compounds of the invention are useful in 

15 treating solid cancers, such as, for example, carcinomas (e.g., of the lungs, pancreas, 
thyroid, bladder or colon), myeloid disorders (e.g., myeloid leukemia) or adenomas 
(e.g., villous colon adenoma). 

The present invention, therefore, provides compounds generally described as aryl 
20 ureas, including both aryl and heteroaryl analogues, which inhibit the raf pathway. 
The invention also provides a method for treating a raf mediated disease state in 
humans or mammals. Thus, the invention is directed to compounds and methods for 
the treatment of cancerous cell growth mediated by raf kinase, comprising 
administering a compound of Formula I 

25 wherein 




I 



30 



2 



WO 99/32436 



PCT/US98/26081 



wherein 



A is 




,4' 



or 




_ r4 . 



R 



5' 



R 3 , R 4 , R 5 and R 6 are each, independently, H, halogen, N0 2 , C M0 - alkyl, optionally 

substituted by halogen up to perhaloalkyl, CL^-alkoxy, optionally 
substituted by halogen up to perhaloalkoxy, C 6 . 12 aryl, optionally 
substituted by C M0 alkyl or C,. 10 alkoxy, or C 5 . 12 hetaryl, optionally 
substituted by C M0 alkyl or C M0 alkoxy, 

and one of R 3 -R 6 can be -X-Y; 

or two adjacent R 3 -R 6 can together be an aryl or hetaryl ring with 5-12 atoms, 
optionally substituted by C M0 -alkyl, C M0 -alkoxy, C 3 _ 10 -cycloalkyl, C 2 . 10 -alkenyl, 
C,. 10 -alkanoyl, C^-aryl, C 5 . 12 -hetaryl; C^-aralkyl, C 6 _ 12 -alkaryl, halogen; NR'R 1 ; 
-N0 2 ; -CF 3 ; -COOR 1 ; -NHCOR 1 ; -CN; -CONR'R 1 ; -S0 2 R 2 ; -SOR 2 ; -SR 2 ; in which R 1 
is H or CYio-alkyl and R 2 is C,. I0 -alkyl, optionally substituted by halogen, up to 
perhalo with -S(0 2 )- optionally incorporated in the aryl or hetaryl ring; 
R 4 ' , R 5 and R 6 ' are independently H, halogen, Cj - C 10 alkyl, optionally substituted by 
halogen up to perhaloalkyl, or by 



N 



\ 



or 



O 



N 



NH 



O 



Cj -C 10 alkoxy optionally substituted by halogen up to perhaloalkoxy or -X-Y, 
and either one of R 4 ', R 5 ' or R 6 ' is -X-Y or two adjacent of R 4 ', R 5 ' and R 6 
together are a hetaryl ring with 5-12 atoms optionally substituted by C,., 0 alkyl, 



WO 99/32436 



PCT/US98/26081 



C,. 10 alkoxy, C 3 ., 0 cycloalkyl, C 2 . 10 alkenyl, C,. I0 alkanoyl, C W2 aryl, C 5 _ 12 

hetaryl or C M2 aralkyl; 
R 6 ' is additionally -NHCOR 1 , - NR 1 COR 1 or N0 2 ; 
R 1 is C,. 10 alkyl optionally substituted by halogen up to perhalo; 
R 3 ' is H, halogen, C,-C, 0 alkyl optionally substituted by halogen up to perhaloalkyl, 

C,-C, 0 alkoxy, optionally substituted by halogen up to perhaloalkoxy; 

X is -CH 2 -, -S- -N(CH 3 )-, -NHC(O)- -CH 2 -S-, -S-CH 2 -, -C(O)-, or -O-; and 
X is additionally a single bond where Y is pyridyl; and 

Y is phenyl, pyridyl, naphthyl, pyridone, pyrazine, pyrimidine, benzodioxane, 
benzopyridine or benzothiazole, each optionally substituted by Cj., 0 -alkyl, 
C M0 -alkoxy, halogen, OH, -SCH 3 , N0 2 or, where Y is phenyl, by 

or a pharmaceutically acceptable salt thereof, 

with the proviso that if X is -O- or -S- , R 3 and R 6 ' are H, and Y is phenyl 
unsubstituted by OH, then R 6 is alkoxy. 

Preferably, R 3 is halogen or C ,_,<,- alkyl, optionally substituted by halogen, up to 
perhaloalkyl; R 4 is H, halogen or N0 2 ; R 5 is H, halogen or C M0 - alkyl; and R 6 is H or 
C,. I0 - alkoxy. More preferably, R 3 is C^-alkyl, CI, F or CF 3 ; R 4 is H, CI, F or N0 2 ; 
R s is H, CI, F or C 4 . 10 -alkyl; and R 6 is H or OCH 3 . Still more preferably, R 3 or R 4 is t- 
butyl. X is preferably -CH 2 - or -S- and Y is phenyl or pyridyl, or X is -O- and Y is 
preferably phenyl, pyridyl or benzthiazole. 

The invention is also directed to a compound of the formula 



O 




The invention is further directed to a method for the treatment of a cancerous cell 
growth mediated by raf kinase, comprising administering a compound of Formula II: 



WO 99/32436 



PCT/US98/26081 



wherein 
A is 




B 



O 

N^N 
H H 




R 



5' 



n 



or 



R 



4' 



10 



15 



20 



25 



B is a substituted or unsubstituted, up to tricyclic aryl or heteroaryl moiety 
of up to 30 carbon atoms with at least one 6-member aromatic structure containing 
0-4 members of the group consisting of nitrogen, oxygen and sulfur, wherein if B is 
substituted it is substituted by one or more substituents selected from the group 
consisting of halogen, up to per-halo, and W n , wherein n is 0-3 and each W is 
independently selected from the group consisting of -CN, -CO z R , -C(0)NR R , 
-C(0)-R 7 , -N0 2 , -OR 7 , - SR 7 , - NR 7 R 7 , -NR 7 C(0)OR 7 , -NR 7 C(0)R 7 , C r C 10 alkyl, 
C 2 -C 10 alkenyl, C r C 10 alkoxy, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 7 -C 24 alkaryl, C 3 -C 13 
heteroaryl, Q-C^ alkheteroaryl, substituted C r C 10 alkyl, substituted C 3 -C 10 
cycloalkyl, substituted C 2 -C 10 alkenyl, substituted C r Ci 0 alkoxy, substituted Q-C^ 

alkheteroaryl and Q-Ar; 

wherein if W is a substituted group, it is substituted by one or more 
substituents independently selected from the group consisting of -CN, -CO z R , 
-C(0)R 7 , -C(0)NR 7 R 7 , -OR 7 , -SR 7 , -NR 7 R 7 , N0 2 , -NR 7 C(0)R 7 , -NR 7 C(0)OR 7 and 

halogen up to per-halo; 

wherein each R 7 is independently selected from H, C 2 -Ci„ alkenyl, C,-C 10 
alkyl, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 3 -C, 3 hetaryl, C 7 -C 24 alkaryl, Q-C^ 
alkheteroaryl, up to per-halosubstituted C r C 10 alkyl, up to per-halosubstituted C 2 - 
C 10 alkenyl, up to per-halosubstituted C 3 -Ci 0 cycloalkyl, up to per-halosubstituted 
C 6 -C M aryl and up to per-halosubstituted C 3 -Ci 3 hetaryl, 

wherein Q is -O-, -S-, -N(R 7 )-, -C(O)-, -CH(OH)-, -(CH^O-, 



5 



WO 99/32436 



PCT/US98/26081 



-NR 7 C(0)NR 7 R 7 -, -NR 7 C(0)-, -C(0)NR 7 -, -(CH 2 ) m S-, -(CH 2 ) m N(R 7 )-, -0(CH 2 ) m -, 
-CHX\ -CXY, -S-(CH 2 ) m - and -N(R 7 )(CH 2 ) m -, 
m = 1-3, and X a is halogen; and 

Ar is a 5-10 member aromatic structure containing 0-2 members of the group 
consisting of nitrogen, oxygen and sulfur, which is unsubstituted or substituted by 
halogen up to per-halo and optionally substituted by Z nl , wherein nl is 0 to 3 and 
each Z is independently selected from the group consisting of -CN, -C0 2 R 7 , 
-C(0)NR 7 R\ -C(O)- NR 7 , -N0 2 , -OR 7 , - SR 7 , - NR 7 R 7 , -NR 7 C(0)OR 7 , -C(0)R 7 , 
-NR 7 C(0)R 7 , C r C 10 alkyl, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 3 -C 13 hetaryl, C 7 -C 24 
alkaryl, Q-C^ alkheteroaryl, substituted C r C 10 alkyl, substituted C 3 -C 10 cycloalkyl, 
substituted C 7 -C 24 alkaryl and substituted C 4 -C 23 alkheteroaryl; wherein the one or 
more substituents of Z is selected from the group consisting of -CN, -C0 2 R 7 , 
-C(0)NR 7 R 7 , -OR 7 , -SR 7 , -N0 2 , -NR 7 R 7 , -NR 7 C(0)R 7 and -NR 7 C(0)OR\ 

R 4 ' , R 5 'and R 6 are each independently H, halogen, C M0 - alkyl, optionally substituted 
by halogen up to perhaloalkyl, 



C 1 -Cj 0 alkoxy, optionally substituted by halogen up to perhaloalkoxy or -X- 



either one of R 4 ' , R 5 ' or R 6 ' is -X-Y or two adjacent of R 4 ' , R 5 ' and R 6 * 
together are a hetaryl ring with 5-12 atoms optionally substituted by C,. 10 alkyl, C,., 0 
alkoxy, C 3 . I0 cycloalkyl, C 2 . 10 alkenyl, C W10 alkanoyl, C M2 aryl, C 5 . 12 hetaryl or C^^ 
ar alkyl; 

R 6 ' is additionally -NHCOR 1 , - NR^OR 1 or N0 2 ; 

R 1 is C,. 10 alkyl optionally substituted by halogen up to perhalo; 




or 




Y, and 



WO 99/32436 



PCT/US98/26081 



R 3 ' is independently H, halogen, C wo alkyl, optionally substituted by halogen up 
to perhaloalkyl, C M0 alkoxy, optionally substituted by halogen up to 
perhaloalkoxy; 

X is -CH 2 -, -S-, -N(CH 3 )-, -NHC(O)-, -CH 2 -S-, -C(O)-, or -Os 
X is additionally a single bond where Y is pyridyl; and 

Y is phenyl, pyridyl, naphthyl, pyridone, pyrazine, pyrimidine, benzodioxane, 
benzopyridine or benzothiazole, each optionally substituted by Ci. 10 -alkyl, 
Ci^o-alkoxy, halogen, OH, -SCH 3> or N0 2 or, where Y is phenyl, by 

-fa 

6 

or a pharmaceutically acceptable salt thereof . 
Preferably, compounds of formula II are of formula Ila: 




Ila 



wherein 

R 3 , R 4 , R 5 and R 6 are each independently H, halogen, N0 2 , C,., 0 - alkyl, optionally 
substituted by halogen, up to perhaloalkyl, or C,., 0 -alkoxy, optionally substituted by 
halogen, up to perhalo; and one of R 3 -R 6 can be -X-Y; or two adjacent R 3 -R 6 can 
together be an aryl or hetaryl ring with 5-12 atoms, optionally substituted by C,. 10 - 
alkyl, C,. 10 -alkoxy, C 3 . 10 -cycloalkyl, C 2 . 10 -alkenyl, C,., 0 -alkanoyl; C 6 . 12 -aryl, C 5 ., 2 - 
hetaryl, Ce, 12 -alkaryl, halogen; -NR 1 ; -N0 2 ; -CF 3 ; -COOR 1 ; -NHCOR 1 ; -CN; 
-CONR'R 1 ; -S0 2 R 2 ; -SOR 2 ; -SR 2 ; in which R 1 is H or C M0 -alkyl, optionally 
substituted by halogen, up to perhalo, and R 2 is C^o-alkyl, optionally substituted by 
halogen, up to perhalo. 



7 



WO 99/32436 



PCT/US98/26081 



In formula I, suitable hetaryl groups B include, but are not limited to, 5-12 carbon- 
atom aromatic rings or ring systems containing 1-3 rings, at least one of which is 
aromatic, in which one or more, e.g., 1-4 carbon atoms in one or more of the rings can 
be replaced by oxygen, nitrogen or sulfur atoms. Each ring typically has 3-7 atoms. 
For example, B can be 2- or 3-furyl, 2- or 3-thienyl, 2- or 4-triazinyl, 1-, 2- or 3- 
pyrrolyl, 1-, 2-, 4- or 5-imidazolyl, 1-, 3-, 4- or 5-pyrazolyl, 2-, 4- or 5-oxazolyl, 3-, 4- 
or 5-isoxazolyl, 2-, 4- or 5-thiazolyl, 3-, 4- or 5-isothiazolyl, 2-, 3- or 4-pyridyl, 2-, 4-, 
5- or 6-pyrimidinyl, 1,2,3-triazol-l-, -4- or -5-yl, 1,2,4-triazol-l-, -3- or -5-yl, 1- or 5- 
tetrazolyl, l,2,3-oxadiazol-4- or -5-yl, l,2,4-oxadiazol-3- or -5-yl, l,3,4-thiadiazol-2- 
or-5-yl, l,2,4-oxadiazol-3- or -5-yl, l,3,4-thiadiazol-2- or -5-yl, l,3,4-thiadiazol-3- 
or _5_ y i, l,2,3-thiadiazol-4- or -5-yl, 2-, 3-, 4-, 5- or 6-2H-thiopyranyl, 2-, 3- or 4-4H- 
thiopyranyl, 3- or 4-pyridazinyl, pyrazinyl, 2-, 3-, 4-, 5-, 6- or 7-benzofuryl, 2-, 3-, 4-, 
5-, 6- or 7-benzothienyl, 1-, 2-, 3-, 4-, 5-, 6- or 7-indolyl, 1-, 2-, 4- or 5- 
benzimidazolyl, 1-, 3-, 4-, 5-, 6- or 7-benzopyrazolyl, 2-, 4-, 5-, 6- or 7-benzoxazolyl, 
3_ ? 4-, 5. 6- or 7-benzisoxazolyl, 1-, 3-, 4-, 5-, 6- or 7-benzothiazolyl, 2-, 4-, 5-, 6- or 
7-benzisothiazolyl, 2-, 4-, 5-, 6- or 7-benz-l,3-oxadiazolyl, 2-, 3-, 4-, 5-, 6-, 7- or 8- 
quinolinyl, 1-, 3-, 4-, 5-, 6-, 7-, 8- isoquinolinyl, 1-, 2-, 3-, 4- or 9-carbazolyl, 1-, 2-, 
3-, 4-, 5-, 6-, 7-, 8- or 9-acridinyl, or 2-, 4-, 5-, 6-, 7- or 8-quinazolinyl, or additionally 
optionally substituted phenyl, 2- or 3-thienyl, 1,3,4-thiadiazolyl, 3-pyrryl, 3-pyrazolyl, 
2-thiazolyl or 5-thiazolyl, etc. For example, B can be 4-methyl-phenyl, 5-methyl-2- 
thienyl, 4-methyl-2-thienyl, l-methyl-3-pyrryl, l-methyl-3-pyrazolyl, 5-methyl-2- 
thiazolyl or 5-methyl-l,2,4-thiadiazol-2-yl. 

Suitable alkyl groups and alkyl portions of groups, e.g., alkoxy, etc. throughout 
include methyl, ethyl, propyl, butyl, etc., including all straight-chain and branched 
isomers such as isopropyl, isobutyl, jec-butyl, tert-butyl, etc. 

Suitable aryl groups include, for example, phenyl and 1- and 2-naphthyl. 

Suitable cycloalkyl groups include cyclopropyl, cyclobutyl, cyclohexyl, etc. The term 
" cycloalkyl" , as used herein, refers to cyclic structures with or without alkyl 
substitutents such that, for example, "C 4 cycloalkyl" includes methyl substituted 



8 



WO 99/32436 



PCT/US98/26081 



cyclopropyl groups as well as cyclobutyl groups. The term "cycloaUeyl" also 
includes saturated heterocyclic groups. 

Suitable halogen groups include F, CI, Br, and/or I, from one to per-substitution (i.e., 
5 all H atoms on a group replaced by a halogen atom) being possible where an alkyl 
group is substituted by halogen, mixed substitution of halogen atom types also being 
possible on a given moiety. 

The present invention is also directed to pharmaceutically acceptable salts of Formula 
10 I. Suitable pharmaceutically acceptable salts are well known to those skilled in the art 
and include basic salts of inorganic and organic acids, such as hydrochloric acid, 
hydrobromic acid, phosphoric acid, methanesulphonic acid, trifluoromethanesulfonic 
acid, sulphonic acid, acetic acid, trifluoroacetic acid, malic acid tartaric acid, citric 
acid, lactic acid, oxalic acid, succinic acid, fumaric acid, maleic acid, benzoic acid, 
15 salicylic acid, phenylacetic acid, and mandelic acid. In addition, pharmaceutically 
acceptable salts include acid salts of inorganic bases, such as salts containing alkaline 
cations (e.g., Li + Na + or K + ), alkaline earth cations (e.g., Mg +2 , Ca +2 or Ba +2 ), the 
ammonium cation, as well as acid salts of organic bases, including aliphatic and 
aromatic substituted ammonium, and quaternary ammonium cations such as those 
20 arising from protonation or peralkylation of triethylamine, AW-diethylamine, N,N- 
dicyclohexylamine, pyridine, ^/,iV-dimethylaminopyridine (DMAP), 1,4- 
diazabicyclo[2.2.2]octane (DABCO), l,5-diazabicyclo[4.3.0]non-5-ene (DBN) and 
l,8-diazabicyclo[5.4.0]undec-7-ene (DBU). 

25 A number of the compounds of Formula I possess asymmetric carbons and can 
therefore exist in racemic and optically active forms. Methods of separation of 
enantiomeric and diastereomeric mixtures are well known to one skilled in the art. 
The present invention encompasses any isolated racemic or optically active form of 
compounds described in Formula I which possess Raf kinase inhibitory activity. 

30 

The compounds of Formula I may be prepared by use of known chemical reactions 
and procedures. Nevertheless, the following general preparative methods are 
presented to aid one of skill in the art in synthesizing the inhibitors, with more 



9 



WO 99/32436 



PCT7US98/26081 



detailed examples being presented in the experimental section describing the working 
examples. 

General Preparative Methods 

The compounds of Formula I may be prepared by the use of known chemical 
reactions and procedures, some from starting materials which are commercially 
available. Nevertheless, general preparative methods are provided below to aid one 
skilled in the art in synthesizing these compounds, with more detailed examples being 
provided in the experimental section which follows. 

Substituted anilines may be generated using standard methods (March. Advanced 
Organic Chemistry, 3 rd Ed.; John Wiley: New York (1985). Larock. Comprehensive 
Organic Transformations; VCH Publishers: New York (1989)). As shown in Scheme 
I, aryl amines are commonly synthesized by reduction of nitroaryls using a metal 
catalyst, such as Ni, Pd, or Pt, and H 2 or a hydride transfer agent, such as formate, 
cyclohexadiene, or a borohydride (Rylander. Hydrogenation Methods; Academic 
Press: London, UK (1985)). Nitroaryls may also be directly reduced using a strong 
hydride source, such as LiAlH 4 (Seyden-Penne. Reductions by the Alumino- and 
Borohydrides in Organic Synthesis; VCH Publishers: New York (1991)), or using a 
zero valent metal, such as Fe, Sn or Ca, often in acidic media. Many methods exist 
for the synthesis of nitroaryls (March. Advanced Organic Chemistry, 3 rd Ed.; John 
Wiley: New York (1985). Larock. Comprehensive Organic Transformations; VCH 
Publishers: New York (1989)). 



H 2 / catalyst 




ArN0 2 




ArNH 2 



(eg. Fe, Sn, Ca) 



Scheme I 



Reduction of Nitroaryls to Aryl Amines 



10 



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Nitroaryls are commonly formed by electrophilic aromatic nitration using HN0 3 , or 
an alternative N0 2 + source. Nitroaryls may be further elaborated prior to reduction. 
Thus, nitroaryls substituted with 



HN0 3 

Ar-H — ► ArNQ 2 



potential leaving groups (eg. F, CI, Br, etc.) may undergo substitution reactions on 
treatment with nucleophiles, such as thiolate (exemplified in Scheme II) or phenoxide. 
Nitroaryls may also undergo Ullman-type coupling reactions (Scheme II). 




ArSH 



base 




<p ^S-Ar 



Br— Ar 



CuO / base 



Scheme II Selected Nucleophilic Aromatic Substitution using Nitroaryls 

Nitroaryls may also undergo transition metal mediated cross coupling 
reactions. For example, nitroaryl electrophiles, such as nitroaryl bromides, iodides or 
triflates, undergo palladium mediated cross coupling reactions with aryl nucleophiles, 
such as arylboronic acids (Suzuki reactions, exemplified below), aryltins (Stille 
reactions) or arylzincs (Negishi reaction) to afford the biaryl (5). 

0 2 N ArB(OR') 2 OsN^^^^ 

> ► > V-Ar 

R ^v=/ Pd(0) r ^a=/ 

4 5 

Either nitroaryls or anilines may be converted into the corresponding arenesulfonyl 
chloride (7) on treatment with chlorosulfonic acid. Reaction of the sulfonyl chloride with 
a fluoride source, such as KF then affords sulfonyl fluoride (8). Reaction of sulfonyl 
fluoride 8 with trimethylsilyl trifluoromethane in the presence of a fluoride source, such as 
tris(dimethylamino)sulfonium difluorotrimethylsiliconate (TASF) leads to the 



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corresponding trifluoromethylsulfone (9). Alternatively, sulfonyl chloride 7 may be 
reduced to the arenethiol (10), for example with zinc amalgum. Reaction of thiol 10 with 
CHC1F 2 in the presence of base gives the difluoromethyl mercaptam (11), which may be 
oxidized to the sulfone (12) with any of a variety of oxidants, including Cr0 3 -acetic 
anhydride (Sedova et al. Zh. Org. Khim. 1970, 6, (568). 



so 2 ci 




Scheme III Selected Methods of Fluorinated Aryl Sulfone Synthesis 

As shown in Scheme IV, non-symmetrical urea formation may involve reaction of an 
aryl isocyanate (14) with an aryl amine (13). The heteroaryl isocyanate may be 
synthesized from a heteroaiyl amine by treatment with phosgene or a phosgene 
equivalent, such as trichloromethyl chloroformate (diphosgene), bis(trichloromethyl) 
carbonate (triphosgene), or A/'^'-carbonyldiimidazole (GDI). The isocyanate may 
also be derived from a heterocyclic carboxylic acid derivative, such as an ester, an 
acid halide or an anhydride by a Curtius-type rearrangement. Thus, reaction of acid 
derivative 16 with an azide source, followed by rearrangement affords the isocyanate. 



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The corresponding carboxylic acid (17) may also be subjected to Curtius-type 
rearrangements using diphenylphosphoryl azide (DPP A) or a similar reagent. 

Ar 1 — NH 2 13 



COCI 2 



t 



Ar— NCO ► Ar'^ K1 >k K1 ,Ar 



14 




N N 
H H 

15 



DPPA 



O O 
Ar^X Ar 1 ^OH 
16 17 

Scheme IV Selected Methods of Non-Symmetrical Urea Formation 

Finally, ureas may be further manipulated using methods familiar to those 
skilled in the art. 



The invention also includes pharmaceutical compositions including a compound of 
Formula I, and a physiologically acceptable carrier. 

10 

The compounds may be administered orally, dermally, parenterally, by injection, by 
inhalation or spray, or sublingually rectally or vaginally in dosage unit formulations. 
The term 'administration by injection' includes intravenous, intraarticular, 
intramuscular, subcutaneous and parenteral injections, as well as use of infusion 
15 techniques. Dermal administration may include topical application or transdermal 
administration. One or more compounds may be present in association with one or 
more non-toxic pharmaceutical^ acceptable carriers and if desired other active 
ingredients. 

20 Compositions intended for oral use may be prepared according to any suitable method 
known to the art for the manufacture of pharmaceutical compositions. Such 
compositions may contain one or more agents selected from the group consisting of 



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diluents, sweetening agents, flavoring agents, coloring agents and preserving agents in 
order to provide palatable preparations. Tablets contain the active ingredient in 
admixture with non-toxic pharmaceutically acceptable excipients which are suitable 
for the manufacture of tablets. These excipients may be, for example, inert diluents, 
such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium 
phosphate; granulating and disintegrating agents, for example, corn starch, or alginic 
acid; and binding agents, for example magnesium stearate, stearic acid or talc. The 
tablets may be uncoated or they may be coated by known techniques to delay 
disintegration and adsorption in the gastrointestinal tract and thereby provide a 
sustained action over a longer period. For example, a time delay material such as 
glyceryl monostearate or glyceryl distearate may be employed. These compounds 
may also be prepared in solid, rapidly released form. 

Formulations for oral use may also be presented as hard gelatin capsules wherein the 
active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, 
calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient 
is mixed with water or an oil medium, for example peanut oil, liquid paraffin or olive 

oil- 
Aqueous suspensions containing the active materials in admixture with excipients 
suitable for the manufacture of aqueous suspensions may also be used. Such 
excipients are suspending agents, for example sodium carboxymethylcellulose, 
methylcellulose, hydroxypropyl-methylcellulose, sodium alginate, 

polyvinylpyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents 
may be a naturally-occurring phosphatide, for example, lecithin, or condensation 
products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, 
or condensation products of ethylene oxide with long chain aliphatic alcohols, for 
example heptadecaethylene oxycetanol, or condensation products of ethylene oxide 
with partial esters derived from fatty acids and hexitol such as polyoxyethylene 
sorbitol monooleate, or condensation products of ethylene oxide with partial esters 
derived from fatty acids and hexitol anhydrides, for example polyethylene sorbitan 
monooleate. The aqueous suspensions may also contain one or more preservatives, 
for example ethyl, or «-propyl /?-hydroxybenzoate, one or more coloring agents, one 



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or more flavoring agents, and one or more sweetening agents, such as sucrose or 
saccharin. 

Dispersible powders and granules suitable for preparation of an aqueous suspension 
by the addition of water provide the active ingredient in admixture with a dispersing 
or wetting agent, suspending agent and one or more preservatives. Suitable dispersing 
or wetting agents and suspending agents are exemplified by those already mentioned 
above. Additional excipients, for example, sweetening, flavoring and coloring agents, 
may also be present. 

The compounds may also be in the form of non-aqueous liquid formulations, e.g., oily 
suspensions which may be formulated by suspending the active ingredients in a 
vegetable oil, for example arachis oil, olive oil, sesame oil or peanut oil, or in a 
mineral oil such as liquid paraffin. The oily suspensions may contain a thickening 
agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such 
as those set forth above, and flavoring agents may be added to provide palatable oral 
preparations. These compositions may be preserved by the addition of an anti-oxidant 
such as ascorbic acid. 

Pharmaceutical compositions of the invention may also be in the form of oil-in-water 
emulsions. The oily phase may be a vegetable oil, for example olive oil or arachis oil, 
or a mineral oil, for example liquid paraffin or mixtures of these. Suitable 
emulsifying agents may be naturally-occurring gums, for example gum acacia or gum 
tragacanth, naturally-occurring phosphatides, for example soy bean, lecithin, and 
esters or partial esters derived from fatty acids and hexitol anhydrides, for example 
sorbitan monooleate, and condensation products of the said partial esters with 
ethylene oxide, for example polyoxyethylene sorbitan monooleate. The emulsions 
may also contain sweetening and flavoring agents. 

Syrups and elixirs may be formulated with sweetening agents, for example glycerol, 
propylene glycol, sorbitol or sucrose. Such formulations may also contain a 
demulcent, a preservative and flavoring and coloring agents. 



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The compounds may also be administered in the form of suppositories for rectal or 
vaginal administration of the drug. These compositions can be prepared by mixing 
the drug with a suitable non-irritating excipient which is solid at ordinary 
temperatures but liquid at the rectal temperature or vaginal temperature and will 
therefore melt in the rectum or vagina to release the drug. Such materials include 
cocoa butter and polyethylene glycols. 

Compounds of the invention may also be administrated transdermally using methods 
known to those skilled in the art (see, for example: Chien; " Transdermal Controlled 
Systemic Medications"; Marcel Dekker, Inc.; 1987. Lipp et al. WO94/04157 
3Mar94). For example, a solution or suspension of a compound of Formula I in a 
suitable volatile solvent optionally containing penetration enhancing agents can be 
combined with additional additives known to those skilled in the art, such as matrix 
materials and bactericides. After sterilization, the resulting mixture can be 
formulated following known procedures into dosage forms. In addition, on treatment 
with emulsifying agents and water, a solution or suspension of a compound of 
Formula I may be formulated into a lotion or salve. 

Suitable solvents for processing transdermal delivery systems are known to those 
skilled in the art, and include lower alcohols such as ethanol or isopropyl alcohol, 
lower ketones such as acetone, lower carboxylic acid esters such as ethyl acetate, 
polar ethers such as tetrahydrofuran, lower hydrocarbons such as hexane, cyclohexane 
or benzene, or halogenated hydrocarbons such as dichloromethane, chloroform, 
trichlorotrifluoroethane, or trichlorofluoroethane. Suitable solvents may also include 
mixtures of one or more materials selected from lower alcohols, lower ketones, lower 
carboxylic acid esters, polar ethers, lower hydrocarbons, halogenated hydrocarbons. 

Suitable penetration enhancing materials for transdermal delivery system are known 
to those skilled in the art, and include, for example, monohydroxy or polyhydroxy 
alcohols such as ethanol, propylene glycol or benzyl alcohol, saturated or unsaturated 
C 8 -C 18 fatty alcohols such as lauryl alcohol or cetyl alcohol, saturated or unsaturated 
C 8 -C 18 fatty acids such as stearic acid, saturated or unsaturated fatty esters with up to 
24 carbons such as methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl, isobutyl, 



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tertbutyl or monoglycerin esters of acetic acid, capronic acid, lauric acid, myristinic 
acid, stearic acid, or palmitic acid, or diesters of saturated or unsaturated dicarboxylic 
acids with a total of up to 24 carbons such as diisopropyl adipate, diisobutyl adipate, 
diisopropyl sebacate, diisopropyl maleate, or diisopropyl fumarate. Additional 
penetration enhancing materials include phosphatidyl derivatives such as lecithin or 
cephalin, terpenes, amides, ketones, ureas and their derivatives, and ethers such as 
dimethyl isosorbid and diethyleneglycol monoethyl ether. Suitable penetration 
enhancing formulations may also include mixtures of one or more materials selected 
from monohydroxy or polyhydroxy alcohols, saturated or unsaturated C 8 -Ci 8 fatty 
alcohols, saturated or unsaturated C 8 -C 18 fatty acids, saturated or unsaturated fatty 
esters with up to 24 carbons, diesters of saturated or unsaturated discarboxylic acids 
with a total of up to 24 carbons, phosphatidyl derivatives, terpenes, amides, ketones, 
ureas and their derivatives, and ethers. 

Suitable binding materials for transdermal delivery systems are known to those skilled 
in the art and include polyacrylates, silicones, polyurethanes, block polymers, 
styrenebutadiene copolymers, and natural and synthetic rubbers. Cellulose ethers, 
derivatized polyethylenes, and silicates may also be used as matrix components. 
Additional additives, such as viscous resins or oils may be added to increase the 
viscosity of the matrix. 

For all regimens of use disclosed herein for compounds of Formula I, the daily oral 
dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight. The 
daily dosage for administration by injection, including intravenous, intramuscular, 
subcutaneous and parenteral injections, and use of infusion techniques will preferably 
be from 0.01 to 200 mg/Kg of total body weight. The daily vaginal dosage regime 
will preferably be from 0.01 to 200 mg/Kg of total body weight. The daily topical 
dosage regimen will preferably be from 0.1 to 200 mg administered between one to 
four times daily. The transdermal concentration will preferably be that required to 
maintain a daily does of from 0.01 to 200 mg/Kg. The daily inhalation dosage 
regimen will preferably be from 0.01 to 10 mg/Kg of total body weight. 



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It will be appreciated by those skilled in the art that the particular method of 
administration will depend on a variety of factors, all of which are considered 
routinely when administering therapeutics. It will also be understood, however, that 
the specific dose level for any given patient will depend upon a variety of factors, 
including, the activity of the specific compound employed, the age of the patient, the 
body weight of the patient, the general health of the patient, the gender of the patient, 
the diet of the patient, time of administration, route of administration, rate of 
excretion, drug combinations, and the severity of the condition undergoing therapy. It 
will be further appreciated by one skilled in the art that the optimal course of 
treatment, i.e., the mode of treatment and the daily number of doses of a compound of 
Formula I or a pharmaceutically acceptable salt thereof given for a defined number of 
days, can be ascertained by those skilled in the art using conventional treatment tests. 

The compounds of Figure I are producible from known compounds (or from starting 
materials which, in turn, are producible from known compounds), e.g., through the 
general preparative methods shown above. The activity of a given compound to 
inhibit raf kinase can be routinely assayed, e.g., according to procedures disclosed 
below. The following examples are for illustrative purposes only and are not 
intended, nor should they be construed to limit the invention in any way. 

The entire disclosure of all applications, patents and publications cited above and 
below, are hereby incorporated by reference, including provisional application 
(Attorney Docket Number Bayer 6 VI), filed on December 22, 1997, as SN 
08/996,344 and converted on December 22, 1998. 

EXAMPLES 

All reactions were performed in flame-dried or oven-dried glassware under a positive 
pressure of dry argon or dry nitrogen, and were stirred magnetically unless otherwise 
indicated. Sensitive liquids and solutions were transferred via syringe or cannula, and 
introduced into reaction vessels through rubber septa. Unless otherwise stated, the 
term 'concentration under reduced pressure' refers to use of a Buchi rotary evaporator 
at approximately 15 mmHg. 

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All temperatures are reported uncorrected in degrees Celsius (°C). Unless otherwise 
indicated, all parts and percentages are by weight. 

Commercial grade reagents and solvents were used without further purification. Thin- 
layer chromatography (TLC) was performed using Whatman® pre-coated glass-backed 
silica gel 60A F-254 250 urn plates. Visualization of plates was effected by one or 
more of the following techniques: (a) ultraviolet illumination, (b) exposure to iodine 
vapor, (c) immersion of the plate in a 10% solution of phosphomolybdic acid in 
ethanol followed by heating, (d) immersion of the plate in a cerium sulfate solution 
followed by heating, and/or (e) immersion of the plate in an acidic ethanol solution of 
2,4-dinitrophenylhydrazine followed by heating. Column chromatography (flash 
chromatography) was performed using 230-400 mesh EM Science® silica gel. 

Melting points (mp) were determined using a Thomas-Hoover melting point apparatus 
or a Mettler FP66 automated melting point apparatus and are uncorrected. Fourier 
transform infrared sprectra were obtained using a Mattson 4020 Galaxy Series 
spectrophotometer. Proton ('H) nuclear magnetic resonance (NMR) spectra were 
measured with a General Electric GN-Omega 300 (300 MHz) spectrometer with either 
Me 4 Si (d 0.00) or residual protonated solvent (CHC1 3 6 7.26; MeOH 8 3.30; DMSO 8 
2.49) as standard. Carbon ( ,3 C) NMR spectra were measured with a General Electric 
GN-Omega 300 (75 MHz) spectrometer with solvent (CDC1 3 8 77.0; MeOD-d 3 ; 8 
49.0; DMSO-d 6 8 39.5) as standard. Low resolution mass spectra (MS) and high 
resolution mass spectra (HRMS) were either obtained as electron impact (EI) mass 
spectra or as fast atom bombardment (FAB) mass spectra. Electron impact mass 
spectra (EI-MS) were obtained with a Hewlett Packard 5989A mass spectrometer 
equipped with a Vacumetrics Desorption Chemical Ionization Probe for sample 
introduction. The ion source was maintained at 250 °C. Electron impact ionization 
was performed with electron energy of 70 eV and a trap current of 300 uA. Liquid- 
cesium secondary ion mass spectra (FAB-MS), an updated version of fast atom 
bombardment were obtained using a Kratos Concept 1-H spectrometer. Chemical 
ionization mass spectra (CI-MS) were obtained using a Hewlett Packard MS-Engine 



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(5989A) with methane or ammonia as the reagent gas (lxl 0" 4 torr to 2.5x1 0" 4 torr). 
The direct insertion desorption chemical ionization (DCI) probe (V accumetrics, Inc.) 
was ramped from 0-1.5 amps in 10 sec and held at 10 amps until all traces of the 
sample disappeared ( -1-2 min). Spectra were scanned from 50-800 amu at 2 sec per 
scan. HPLC - electrospray mass spectra (HPLC ES-MS) were obtained using a 
Hewlett-Packard 1100 HPLC equipped with a quaternary pump, a variable 
wavelength detector, a C-18 column, and a Finnigan LCQ ion trap mass spectrometer 
with electrospray ionization. Spectra were scanned from 120-800 amu using a 
variable ion time according to the number of ions in the source. Gas chromatography 
- ion selective mass spectra (GC-MS) were obtained with a Hewlett Packard 5890 gas 
chromatograph equipped with an HP-1 methyl silicone column (0.33 mM coating; 25 
m x 0.2 mm) and a Hewlett Packard 5971 Mass Selective Detector (ionization energy 
70 eV). Elemental analyses are conducted by Robertson Microlit Labs, Madison NJ. 

All compounds displayed NMR spectra, LRMS and either elemental analysis or 
HRMS consistant with assigned structures. 

List of Abbreviations and Acronyms: 



AcOH acetic acid 

anh anhydrous 

BOC terf-butoxycarbonyl 

cone concentrated 

dec decomposition 

DMPU 1 ,3-dimethyl-3,4,5,6-tetrahydro-2(lH)-pyrimidinone 

DMF TViiV-dimethylformamide 

DMSO dimethylsulfoxide 

DPP A diphenylphosphoryl azide 

EtOAc ethyl acetate 

EtOH ethanol (100%) 

Et 2 0 diethyl ether 

Et 3 N triethylamine 

w-CPBA 3-chloroperoxybenzoic acid 

MeOH methanol 



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pet. ether petroleum ether (boiling range 30-60 °C) 

THF tetrahydrofuran 

TFA trifluoroacetic acid 

Tf trifluoromethanesulfonyl 



A, General Methods for Synthesis of Substituted Anilines 
Al. Synthesis of 2,5-Dioxopyrrolidinylanilines 




Step 1. 4-terr-Butyl-l-(2,S-dioxo-l-pyrroIidinyl)-2-nitrobenzene: To a solution of 
4-terMDutyl-2-nitroaniline (1.04 g, 5.35 mmol) in xylene (25 mL) was added succinic 
anhydride (0.0535 g, 5.35 mmol) and triethylamine (0.75 mL, 5.35 mmol). The 
reaction mixture was heated at the reflux temp, for 24 h, cooled to room temp, and 
diluted with Et 2 0 (25 mL). The resulting mixture was sequentially washed with a 
10% HC1 solution (50 mL), a saturated NH 4 C1 solution (50 mL) and a saturated NaCl 
solution (50 mL), dried (MgS0 4 ), and concentrated under reduced pressure. The 
residue was purified by flash cromatography (60% EtOAc/40% hexane) to yield the 
succinimide as a yellow solid (1.2 g, 86%): mp 135-138 °C; 'H NMR (CHC1 3 ) 5 1.38 
(s, 9H), 2.94-2.96 (m, 4H), 7.29-7.31 (m, 1H), 7.74-7.78 (m, 1H), 8.18-8.19 (m, 1H). 




Step 2. 5-terr-Butyl-2-(2,5-dioxo-l-pyrrolidinyl)aniline: To a solution of 
butyl-l-(2,5-dioxo-l-pyrrolidinyl)-2-nitrobenzene (1.1 g, 4.2 mmol) in EtOAc (25 
mL) was added a 10% Pd/C (0.1 g). The resulting slurry was placed under a H 2 

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atmosphere using 3 cycles of an evacuate-quench protocol and was allowed to stir 
under a H 2 atmosphere for 8 h. The reaction mixture was filtered through a pad of 
Celite® and the residue was washed with CHC1 3 . The combined filtrate was 
concentrated under reduced pressure to yield the desired aniline as an off-white solid 
(0.75 g, 78%): mp 208-211 °C; 'H-NMR (DMSO-d 6 ) 8 1.23 (s, 9H), 2.62-2.76 (m, 
4H), 5.10 (br s, 2H), 6.52-6,56 (m, 1H), 6.67-6.70 (m, 2H). 

A2. General Method for the Synthesis of Tetrahydrofuranyloxyanilines 



Step 1.4-ter*-Butyl-l-(3-tetrahydrofuranyIoxy)-2-nitrobenzene: To a solution of 4- 
tert-butyl-2-nitrophenol (1.05 g, 5.4 mmol) in anh THF (25 mL) was added 3- 
hydroxytetrahydrofuran (0.47 g, 5.4 mmol) and triphenylphosphine (1.55 g, 5.9 
mmol) followed by diethyl azodicarboxylate (0.93 ml, 5.9 mmol) and the mixture was 
allowed to stir at room temp, for 4 h. The resulting mixture was diluted with Et 2 0 (50 
mL) and washed with a saturated NH 4 C1 solution (50 mL) and a saturated NaCl 
solution (50 mL), dried (MgS0 4 ), and concentrated under reduced pressure. The 
residue was purified by flash cromatography (30% EtOAc/70% hexane) to yield the 
desired ether as a yellow solid (1.3 g, 91%): 'H-NMR (CHC1 3 ) 6 1.30 (s, 9H), 2.18- 
2.24 (m, 2H), 3.91-4.09 (m, 4H), 5.00-5.02 (m, 1H), 6.93 (d, J=8.8 Hz, 1H), 7.52 (dd, 
J=2.6, 8.8 Hz, 1H), 7.81 (d, J=2.6 Hz, 1H). 





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Step2.5-^r/-Butyl-2-(3-tetrahydrofuranyloxy)aniIine: To a solution of 4-tert- 
butyl- l-(3-tetrahydrofuranyloxy)-2-nitrobenzene (LI 7 g, 4.4 mmol) in EtOAc (25 
mL) was added 10% Pd/C (0.1). The resulting slurry was placed under a H 2 
atmosphere using 3 cycles of an evacuate-quench protocol and was allowed to stir 
under a H 2 atmosphere for 8 h. The reaction mixture was filtered through a pad of 
Celite® and washed with CHC1 3 . The combined filtrate was concentrated under 
reduced pressure to yield of the desired aniline as a yellow solid (0.89 g, 86%): mp 
79-82 °C; 'H-NMR (CHC1 3 ) 5 1.30 (s, 9H), 2.16-2.20 (m, 2H), 3.78 (br s, 2H), 3.85- 
4.10 (m, 4H),4.90 (m, 1H), 6.65-6.82 (m, 3H). 

A3* General Method for the Synthesis of Trifluoromethanesulfonylanilines 

SQ 2 F 



Step 1. 2-Methoxy-5-(fluorosulfonyl)acetanilide: Acetic anhydride (0.90 mL, 9.6 
mmol) was added to a solution of 4-methoxymetanilyl fluoride (1.0 g, 4.8 mmol) in 
pyridine (15 mL). After being stirred at room temp, for 4 h, the reaction mixture was 
concentrated under reduced pressure. The resulting residue was dissolved in CH 2 C1 2 
(25 mL), washed with a saturated NaHC0 3 solution (25 mL), dried (Na^OJ, and 
concentrated under reduced pressure to give a foam which was triturated with a 
Et 2 0/hexane solution to provide the title compound (0.85 g): *H-NMR (CDC1 3 ) 8 
2.13 (s, 3H), 3.98 (s, 3H), 7.36 (d, .7=8.5 Hz, 1H), 7.82 (dd, J=2.6, 8.8 Hz, 1H), 8.79 
(d, J=2.2 Hz, 1H), 9.62 (br s, 1H). 



suspension of tris(dimethylamino)sulfonium difluorotrimethylsiliconate (0.094 g, 0.34 
mmol) in THF (4 mL) was added a solution of (trifluoromethyl)trimethylsilane (1.0 
mL, 6.88 mmol) in THF (3 mL) followed by a solution of 2-methoxy-5- 
(fluorosulfonyl)acetanilide (0.85 g, 3.44 mmol) in THF (3 mL). The reaction mixture 
was stirred for 2 h on an ice bath, then was allowed to warm to room temp, and was 



MeO 




MeO 




Step 2.2-Methoxy-5-(trifluoromethanesulfonyl)acetanilide: To an ice-cooled 



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then concentrated under reduced pressure. The resulting residue was dissolved in 
CH 2 C1 2 (25 mL), washed with water (25 mL), dried (Na^OJ, and concentrated under 
reduced pressure. The resulting material was purified by flash chromatography (3% 
MeOH/97% CH 2 C1 2 ) to provide the title compound as a white solid (0.62 g): 'H-NMR 
(CDC1 3 ) 5 2.13 (s, 3H) 4.00 (s, 3H), 7.42 (d, J=8.8 Hz, 1H), 7.81 (dd, 7=2.6, 8.8 Hz, 
1H), 8.80 (d, J=2.2 Hz, 1H), 9.64 (br s, 1H); FAB-MS m/z 298 ((M+l) + ). 



Step 3.2-Methoxy-5-(trifluoromethanesulfonyl)aniline: A solution of 2-methoxy- 
5-(trifluoromethanesulfonyl)acetanilide (0.517 g, 1.74 mmol) in EtOH (5 mL) and a 1 
N HC1 solution (5 mL) was heated at the reflux temp, for 4 h and the resulting mixture 
was concentrated under reduced pressure. The residue was dissolved in CH 2 C1 2 (30 
mL), washed with water (30 mL), dried (Na^OJ, and concentrated under reduced 
pressure to afford the title compound as a gum (0.33 g): 'H-NMR (CDC1 3 ) 5 3.90 (s, 
3H) 5.57 (br s, 2H), 7.11-7.27 (m, 3H); FAB-MS m/z 256 ((M+l) + ). This material 
was used in urea formation without further purification. 

General Method for Aryl Amine Formation via Phenol Nitration Followed by 
Ether Formation and Reduction 



Step 1. 2-Nitro-5-terf-butylphenol : A mixture of fuming nitric acid (3.24 g, 77.1 
mmol) in glacial HO Ac (10 mL) was added drop wise to a solution of m-tert- 
butylphenol (11.58 g, 77.1 mmol) in glacial HOAc (15 mL) at 0 °C. The mixture was 
allowed to stir at 0 °C for 15 min then warmed to room temp. After 1 h the mixture 
was poured into ice water (100 mL) and extracted with E^O (2 x 50 mL). The organic 
layer was washed with a saturated NaCl solution (100 mL), dried (MgS0 4 ) and 
concentrated in vacuo. The residue was purified by flash chromatography (30% 
EtO Ac/70% hexane) to give the desired phenol (4.60 g, 31%): 'H-NMR (DMSO-d 6 ) 8 




MeO 




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1.23 (s, 9H), 7.00 (dd, 7=1.84, 8.83 Hz, 1H), 7.07 (d, .7=1.84 Hz, 1H), 7.82 (d, 7=8.83 
Hz, 1H), 10.74 (s, 1H). 




OMe 



Step 2. 2-Nitro-5-terf-butylanisole: A slurry of 2-nitro-5-terr-butylphenol (3.68 g, 
5 18.9 mmol) and K 2 C0 3 (3.26 g, 23.6 rnmol) in anh DMF (100 mL) was stirred at 
room temp with stirring for 15 min then treated with iodomethane (2.80 g, 19.8 mmol) 
via syringe. The reaction was allowed to stir at room temp for 1 8 h., then was treated 
with water (100 mL) and extracted with EtOAc (2 x 100 mL). The combined organic 
layers were washed with a saturated NaCl solution (50 mL), dried (MgS0 4 ) and 
10 concentrated in vacuo to give the desired ether (3.95 g, 100%): 'H-NMR (DMSO-d 6 ) 
5 1.29 (s, 9H), 3.92 (s, 3H), 7.10 (dd, 7=1.84, 8.46 Hz, 1H), 7.22 (d, 7=1.84 Hz, 1H), 
7.79 (d, 7=8.46 Hz, 1H). This material was used in the next step without further 
purification. 




OMe 



15 Step 3. 4-terf-Butyl-2-methoxyaniIine: A solution of 2-mtro-5-*ert-butylanisole 
(3.95 g, 18.9 mmol) in MeOH (65 mL) and added to a flask containing 10% Pd/C in 
MeOH (0.400 g), then placed under a H 2 atmosphere (balloon). The reaction was 
allowed to stir for 18 h at room temp, then filtered through a pad of Celite® and 
concentrated in vacuo to afford the desired product as a dark sitcky solid (3.40 g, 

20 99%): 'H-NMR (DMSO-cLj 8 1.20 (s, 9H), 3.72 (s, 3H), 4.43 (br s, 2H), 6.51 (d, 
7=8.09 Hz, 1H), 6.64 (dd, 7=2.21, 8.09 Hz, 1H), 6.76 (d, 7=2.21 Hz, 1H). 

A5. General Method for Aryl Amine Formation via Carboxylic Acid Esterification 
Followed by Reduction 



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Step 1 . Methyl 2-Nitro-4-(trifluoromethyl)benzoate: To a solution of 2-nitro-4- 
(trifluoromethyl)benzoic acid (4.0 g, 17.0 mmol) in MeOH (150 mL) at room temp 
was added cone H 2 S0 4 (2.5 mL). The mixture was heated at the reflux temp for 24 h., 

5 cooled to room temp and concentrated in vacuo. The residue was diluted with water 
(100 mL) and extracted with EtOAc (2 x 100 mL). The combined organic layers were 
washed with a saturated NaCl solution, dried (MgSOJ, concentrated in vacuo. The 
residue was purified by flash chromatography (14% EtOAc/86% hexane) to give the 
desired ester as a pale yellow oil (4.17 g, 98%): 'H-NMR (DMSO-d 6 ) 8 3.87 (s, 3H), 

10 8.09 (d, 7=7.72 Hz, 1H), 8.25 (dd, 7=1.11, 8.09 Hz, 1H), 8.48 (d, 7=1.11 Hz, 1H). 




Step 2 . Methyl 2-Amino-4-(trifluoromethyl)benzoate: A solution of methyl 2-nitro- 
4-(trifluoromethyl)benzoate (3.90 g, 15.7 mmol) in EtOAc (100 mL) and added to a 
flask containing 10% Pd/C (0.400 mg) in EtOAc (10 mL), then placed under a H 2 
15 atmosphere (balloon). The reaction was allowed to stir for 18 h at room temp, then 
was filtered through Celite® and concentrated in vacuo to afford the desired product as 
a white crystalline solid (3.20 g, 93%): 'H-NMR (DMSO-d 6 ) 5 3.79 (s, 3H), 6.75 (dd, 
7=1.84, 8.46 Hz, 1H), 6.96 (br s, 2H), 7.11 (d, 7=0.73 Hz, 1H), 7.83 (d, 7=8.09 Hz, 
1H). 

20 

A6. General Method for Aryl Amine Formation via Ether Formation Followed Ester 
Saponification, Curtius Rearrangement, and Carbamate Deprotection 




C0 2 Me 
OMe 



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Step 1. Methyl 3-Methoxy-2-naphttaoate: A slurry of methyl 3-hydroxy-2- 
naphthoate (10.1 g, 50.1 mmol) and K 2 C0 3 (7.96 g, 57.6 mmol) in DMF (200 mL) 
was stirred at room temp for 15 min, then treated with iodomethane (3.43 mL, 55.1 
mmol). The mixture was allowed to stir at room temp overnight, then was treated 
with water (200 mL). The resulting mixture was extracted with EtOAc (2 x 200 mL). 
The combined organic layers were washed with a saturated NaCl solution (100 mL), 
dried (MgS0 4 ), concentrated in vacuo (approximately 0.4 mmHg overnight) to give 
the desired ether as an amber oil (10.30 g): 'H-NMR (DMSO-d 6 ) 6 2.70 (s, 3H), 2.85 
(s, 3H), 7.38 (app t, .7=8.09 Hz, 1H), 7.44 (s, 1H), 7.53 (app t, J=8.09 Hz, 1H), 7.84 
(d, J=8.09 Hz, 1H), 7.90 (s, 1H), 8.21 (s, 1H). 




Step 2. 3-Methoxy-2-naphthoic Acid: A solution of methyl 3-methoxy-2- 
naphthoate (6.28 g, 29.10 mmol) and water (10 mL) in MeOH (100 mL) at room temp 
was treated with a 1 N NaOH solution (33.4 mL, 33.4 mmol). The mixture was heated 
at the reflux temp for 3 h, cooling to room temp, and made acidic with a 10% citric 
acid solution. The resulting solution was extracted with EtOAc (2 x 100 mL). The 
combined organic layers were washed with a saturated NaCl solution, dried (MgS0 4 ) 
and concentrated in vacuo. The residue was triturated with hexanes and washed 
several times with hexanes to give the desired carboxylic acid as a white crystalline 
solid (5.40 g, 92%): 'H-NMR (DMSO-d 6 ) 8 3.88 (s, 3H), 7.34-7.41 (m, 2H), 7.49-7.54 
(m, 1H), 7.83 (d, J-8.09 Hz, 1H), 7.91 (d, J=8.09 Hz, 1H), 8.19 (s, 1H), 12.83 (br s, 
1H). 




Step 3. 2-(iV-(Carbobenzyloxy)amino-3-methoxynaphthalene: A solution of 3- 
methoxy-2-naphthoic acid (3.36 g, 16.6 mmol) and Et 3 N (2.59 mL, 18.6 mmol) in anh 
toluene (70 mL) was stirred at room temp, for 15 min., then treated with a solution of 



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diphenylphosphoryl azide (5.12 g, 18.6 mmol) in toluene (10 mL) via pipette. The 
resulting mixture was heated at 80 °C for 2 h. After cooling the mixture to room temp, 
benzyl alcohol (2.06 mL, 20 mmol) was added via syringe. The mixture was then 
warmed to 80 °C overnight. The resulting mixture was cooled to room temp., 

5 quenched with a 10% citric acid solution, and extracted with EtOAc (2 x 100 mL). 
The combined organic layers were washed with a saturated NaCl solution, dried 
(MgS0 4 ), and concentrated in vacuo. The residue was purified by flash 
chromatography (14% EtOAc/86% hexane) to give the benzyl carbamate as a pale 
yellow oil (5.1 g, 100%): 'H-NMR (DMSO-d 6 ) 8 3.89 (s, 3H), 5.17 (s, 2H), 7.27-7.44 

10 (m, 8H), 7.72-7.75 (m, 2H), 8.20 (s, 1H), 8.76 (s, 1H). 




Step 4.2-Amino-3-methoxynaphthalene: A slurry of 2-(A^(carbobenzyloxy)amino- 
3-methoxynaphthalene (5.0 g, 16.3 mmol) and 10% Pd/C (0.5 g) in EtOAc (70mL) 
was maintained under a H 2 atmospheric (balloon) at room temp, overnight. The 
1 5 resulting mixture was filtered through Celite® and concentrated in vacuo to give the 
desired amine as a pale pink powder (2.40 g, 85%): 'H-NMR (DMSO-d 6 ) 5 3.86 (s, 
3H), 6.86 (s, 2H), 7.04-7.16 (m, 2H), 7.43 (d, .7=8.0 Hz, 1H), 7.56 (d, J-8.0 Hz, 1H); 
EI-MS m/z 173 (M + ). 

2A7. General Method for the Synthesis of Aryl Amines via Metal-Mediated Cross 
Coupling Followed by Reduction 




OTf 



Step 1.5-^-ButyI-2-(trifluoromethanesulfonyl)oxy-l-nitrobenzene: To an ice 

cold solution of 4-ter^butyl-2-mtrophenol (6.14 g, 31.5 mmol) and pyridine (10 mL, 
25 125 mmol) in CH 2 C1 2 (50 mL) was slowly added trifluoromethanesulfonic anhydride 
(10 g, 35.5 mmol) via syringe. The reaction mixture was stirred for 15 min, then 

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allowed to warm up to room temp, and diluted with CH 2 C1 2 (100 mL). The resulting 
mixture was sequentially washed with a 1M NaOH solution (3 x 100 mL), and a 1M 
HC1 solution (3 x 100 mL), dried (MgS0 4 ), and concentrated under reduced pressure 
to afford the title compound (8.68 g, 84%): ^-NMR (CDC1 3 ) 8 1.39 (s, 9H), 7.30- 
8.20 (m, 3H). 




Step 2. 5-terf-Butyl-2-(3-fluorophenyl)-l -nitrobenzene: A mixture of 3- 
fluorobenzeneboronic acid (3.80 g, 27.5 mmol), KBr (2.43 g, 20.4 mmol), K 3 P0 4 (6.1 
g, 28.8 mmol), and Pd(PPh 3 ) 4 (1.0 g, 0.9 mmol) was added to a solution of 5-tert- 
butyl-2-(trifluoromethanesulfonyl)oxy-l -nitrobenzene (6.0 g, 18.4 mmol) in dioxane 
(100 mL). The reaction mixture was heated at 80 °C for 24 h, at which time TLC 
indicated complete reaction. The reaction mixture was treated with a saturated NH 4 C1 
solution (50 mL) and extracted EtOAc (3 x 100 mL). The combined organic layers 
were dried (MgS0 4 ) and concentrated under reduced pressure. The residue was 
purified by flash chromatography (3% EtOAc/97% hexane) to give the title compound 
(4.07 g, 81%): 'H-NMR (CDC1 3 ) 8 1.40 (s, 9H), 6.90-7.90 (m, 7H). 




Step 3.5-/^-Butyl-2-(3-fluorophenyI)aniIine: To a solution of 5-ter*-butyl-2-(3- 
fluorophenyl)-l -nitrobenzene (3.5 g, 12.8 mmol) and EtOH (24 mL) in EtOAc (96 
mL) was added 5% Pd/C (0.350 g) and the resulting slurry was stirred under a H 2 
atmosphere for 24 h, at which time TLC indicated complete consumption of starting 
material. The reaction mixture was filtered through a pad of Celite® to give the 



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desired product (2.2 g, 72%): 'H-NMR (CDC1 3 ) 5 1.35 (s, 9H), 3.80 (br s, 2H), 6.90- 
7.50 (m, 7H). 

A8. General Method for the Synthesis of Nitroanilines 

H 2 N H 
Step 1.4-(4-(2-Propoxycarbonylamino)phenyl)methylaniline: A solution of di-tert- 
butyl dicarbonate (2.0 g, 9.2 mmol) and 4,4'-methylenedianiline (1.8g, 9.2 mmol) in 
DMF (100 mL) was heated at the reflux temp, for 2 h, then cooled to room temp. 
This mixture was diluted with EtOAc (200 mL) sequentially washed with a saturated 
NH 4 C1 (200 mL) and a saturated NaCl solution (100 mL), and dried (MgSOJ. The 
residue was purified by flash chromatography (30% EtOAc/70% hexane) to give the 
desired carbamate (1.3 g, 48%): 'H-NMR (CDC1 3 ) 8 1.51 (s, 9H), 3.82 (s, 2H), 6.60- 
7.20 (m, 8H). 




O z N 

Step 2.4-(4-(2-Propoxycarbonylamino)phenyI)methyl-l-nitrobenzene: To an ice 

cold solution of 4-(4-(2-propoxycarbonylamino)phenyl)methylaniline (1.05 g, 3.5 
mmol) in CH 2 C1 2 (15 mL) was added m-CPBA (1.2 g, 7.0 mmol). The reaction 
mixture was slowly allowed to warm to room temp, and was stirred for 45 min, at 
which time TLC indicated disappearance of starting material. The resulting mixture 
was diluted with EtOAc (50 mL), sequentially washed with a 1M NaOH solution (50 
mL) and a saturated NaCl solution (50 mL), and dried (MgS0 4 ). The residue was 
purified by flash chromatography (20% EtOAc/80% hexane) to give the desired 
nitrobenzene (0.920 g): FAB-MS m/z 328 (M+). 




0 2 N 

Step 3.4-(4-Nitrophenyl)methylaniline: To a solution of 4-(4-(2- 

propoxycarbonylamino)phenyl)methyl-l -nitrobenzene (0.920 g, 2.8 mmol) in dioxane 
(10 mL) was added a cone. HC1 solution (4.0 mL) and the resulting mixture was 
heated at 80 °C for 1 h at which time TLC indicated disappearance of starting 



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material. The reaction mixture was cooled to room temp. The resulting mixture was 
diluted with EtOAc (50 mL), then washed with a 1M NaOH solution (3 x 50 mL), and 
dried (MgS0 4 ) to give the desired aniline (0.570 mg, 89%): 'H-NMR (CDC1 3 ) 8 3.70 
(br s, 2H), 3.97 (s, 2H), 6.65 (d, .7=8.5 Hz, 2H), 6.95 (d, .7=8.5 Hz, 2H), 7.32 (d, .7=8.8 
Hz, 2H), 8.10 (d, 7=8.8 Hz, 2H). 

General Method for Synthesis of Aryl Anilines via Alkylation of a Nitrophenol 
Followed by Reduction 

O 

r^N^ — Br 

Step 1.4-(a-Bromoacetyl)morpholine: To an ice cold solution of morpholine (2.17 
g, 24.9 mmol) and diisopropylethylamine (3.21 g, 24.9 mmol) in CH 2 C1 2 (70 mL) was 
added a solution of bromoacetyl bromide (5.05 g, 25 mmole) in CH 2 C1 2 (8 mL) via 
syringe. The resulting solution was kept at 0 °C for 45 min, then was allowed to 
warm to room temp. The reaction mixture was diluted with EtOAc (500 mL), 
sequentially washed with a 1M HC1 solution (250 mL) and a saturated NaCl solution 
(250 mL), and dried (MgS0 4 ) to give the desired product (3.2 g, 62%): 'H-NMR 
(DMSO-d 6 ) 8 3.40-3.50 (m, 4H), 3.50-3.60 (m, 4H), 4.11 (s, 2H). 




Step 2.2-(^V-Morpholinylcarbonyl)methoxy-5-terr-butyl-l-nitrobenzene: A slurry 
of 4-rert-butyl-2-nitrophenol (3.9 g, 20 mmol) and K 2 C0 3 (3.31 g, 24 mmol) in DMF 
(75 mL) was stirred at room temp, for 15 minutes, then a solution of 4-(o> 
bromoacetyl)morpholine (4.16 g, 20 mmol) in DMF (10 mL) was added. The reaction 
was allowed to stir at room temp, overnight, then was diluted with EtOAc (500 mL) 
and sequentially washed with a saturated NaCl solution (4 x 200 mL) and a 1M NaOH 
solution (400 mL). The residue was purified by flash chromatography (75% 
EtOAc/25% hexane) to give the nitrobenzene (2.13 g, 33%): 'H-NMR (DMSO-d 6 ) 8 



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1.25 (s, 9H), 3.35-3.45 (m, 4H), 3.50-3.58 (m, 4H), 5.00 (s, 2H), 7.12 (d, J=8.8 Hz, 
1H), 7.50-7.80 (m, 2H). 




Step 3. 2-(iV-Morpholinylcarbonyl)methoxy-5-fert-butylaniline: To a solution of 2- 
5 (7^-morpholinylcarbonyl)methoxy-5-rert-butyl-l-nitrobenzene(2.13 g, 6.6 mmol) and 
EtOH (10 mL) in EtOAc (40 mL) was added 5% Pd/C (0.215 g). The resulting slurry 
was stirred under a H 2 atmosphere for 6 h, at which time TLC indicated complete 
consumption of starting material. The reaction mixture was filtered through a pad of 
Celite® to give the desired product (1.9 g, 98%): 'H-NMR (DMSO-d 6 ) 5 1.18 (s, 9H), 
10 3.40-3.50 (m, 4H), 3.50-3.60 (m, 4H), 4.67 (br s, 2H), 4.69 (s, 2H), 6.40-6.70 (m, 3H). 

A10. General Method for Aryl Amine Formation via Nitrophenol Alkylation Followed 
by Reduction 




NO- 



15 Step 1.5-tert-Butyl-2-(2-hydroxyethoxy)-l-nitrobenzene: A solution of A-tert- 
butyl-2-nitrophenol (30 g, 0.15 mol) and tetra-n-butylammonium fluoride (0.771 g, 
3.0 mmol) in ethylene carbonate (10.24 mL. 0.15 mol) was heated at 150 °C for 18 h, 
then cooled to room temp, and separated between water (50 mL) and CH 2 C1 2 (50 mL). 
The organic layer was dried (MgS0 4 ) and concentrated under reduced pressure. The 

20 residue was purified by column chromatography (20% EtOAc/80% hexane) to afford 
the desired product as a brown oil (35.1 g, 90%): 'H-NMR (DMSO-d*) 8 1.25 (s, 9H), 
3.66-3.69 (m, 2H), 4.10-4.14 (t, J=5.0 Hz, 2H), 4.85 (t, .7=5.0 Hz, 1H), 7.27 (d, .7=8.8 
Hz, 1H), 7.60-7.64 (m, 1H), 7.75 (d, .7=2.6 Hz, 1H). 



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I ° 




NO z 



Step 2. 5-tert-ButyI-2-(2-/crt-butoxycarbonyloxy)ethoxy)-l-nitrobenzene: A 

solution of 5-ferf-butyl-2-(2-hydroxyethoxy)-l -nitrobenzene (0.401 g, 1.68 mmol), di- 
tert-butyl dicarbonate (0.46 mL, 2.0 mmol) and dimethylaminopyridine (0.006 g, 0.05 
mmol) in CH 2 C1 2 (15 mL) was stirred at room temp, for 30 min, at which time TLC 
indicated consumption of starting material. The resulting mixture was washed with 
water (20 mL), dried (MgS0 4 ) and concentrated under reduced pressure. The residue 
was purified by column chromatography (3% MeOH/97% CH 2 C1 2 ) to give the desired 
product as a yellow oil (0.291 g, 51%): 'H-NMR (DMSO-d 6 ) 5 1.25 (s, 9H), 1.38 (s, 
9H), 4.31 (br s, 4H), 7.27 (d, 7=9.2 Hz, 1H) 7.64 (dd, J=2.6, 8.8 Hz, 1H) 7.77 (d, 
.7=2.6 Hz, 1H). 




NH 2 



Step3.5-rer/-Butyl-2-(2-tert-butoxycarbonyloxy)ethoxy)aniUne: To a mixture of 
5-ter/-butyl-2-(2-fer/-butoxycarbonyloxy)ethoxy)-l -nitrobenzene (0.290 g, 0.86 
mmol) and 5% Pd/C (0.058 g) in MeOH (2 mL) was ammonium formate (0.216 g, 
3.42 mmol), and the resulting mixture was stirred at room temp, for 12 h, then was 
filtered through a pad of Celite® with the aid of EtOH. The filtrate was concentrated 
under reduced pressure and the residue was purified by column chromatography (2% 
MeOH/98% CH 2 C1 2 ) tp give the desired product as a pale yellow oil (0.232 g, 87%): 
TLC (20% EtO Ac/80% hexane) 0.63; 'H-NMR (DMSO-d 6 ) 8 1.17 (s, 9H), 1.39 (s, 
9H), 4.03-4.06 (m, 2H), 4.30-4.31 (m, 2H), 4.54 (br s, 2H), 6.47 (dd, .7=2.2, 8.1 Hz, 
1H) 6.64-6.67 (m, 2H). 



All. General Method for Substituted Aniline Formation via Hydrogenation of 



a Nitroarene 



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4-(4-PyridinylmethyI)aniline: To a solution of 4-(4-nitrobenzyl)pyridine (7.0 g, 
32.68 mmol) in EtOH (200 mL) was added 10% Pd/C (0.7 g) and the resulting slurry 
was shaken under a H 2 atmosphere (50 psi) using a Parr shaker. After 1 h, TLC and 
5 *H-NMR of an aliquot indicated complete reaction. The mixture was filtered through a 
short pad of Celite®. The filtrate was concentrated in vacuo to afford a white solid (5.4 
g, 90%): 'H-NMR (DMSO-d 6 ) 8 3.74 (s, 2H), 4.91 (br s, 2H), 6.48 (d, J=8.46 Hz, 
2H), 6.86 (d, J-8.09 Hz, 2H), 7.16 (d, .7=5.88 Hz, 2H), 8.40 (d, J-5.88 Hz, 2H); EI- 
MS m/z 184 (M + ). This material was used in urea formation reactions without further 

10 purification. 

A12. General Method for Substituted Aniline Formation via Dissolving Metal 
Reduction of a Nitroarene 




15 4-(2-Pyridinylthio)aniline: To a solution of 4-(2-pyridinylthio)-l -nitrobenzene 
(Menai ST 3355A; 0.220 g, 0.95 mmol) and H2O (0.5 mL) in AcOH ( 5 mL) was 
added iron powder (0.317 g, 5.68 mmol) and the resulting slurry stirred for 16 h at 
room temp. The reaction mixture was diluted with EtOAc (75 mL) and H2O (50 mL), 
basified to pH 10 by adding solid K 2 C0 3 in portions {Caution: foaming). The organic 

20 layer was washed with a saturated NaCl solution, dried (MgS0 4 ), concentrated in 
vacuo. The residual solid was purified by MPLC (30% EtOAc/70% hexane) to give 
the desired product as a thick oil (0.135 g, 70%): TLC (30% EtOAc/70% hexanes) 
0.20. 

2A13a. General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 




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Step 1. l-Methoxy-4-(4-nitrophenoxy)benzene: To a suspension of NaH (95%, 
1.50 g, 59 mmol) in DMF (100 mL) at room temp, was added dropwise a solution of 
4-methoxyphenol (7.39 g, 59 mmol) in DMF (50 mL). The reaction was stirred 1 h, 
then a solution of l-fluoro-4-nitrobenzene (7.0 g, 49 mmol) in DMF (50 mL) was 

5 added dropwise to form a dark green solution. The reaction was heated at 95 °C 
overnight, then cooled to room temp., quenched with H 2 0, and concentrated in vacuo. 
The residue was partitioned between EtOAc (200 mL) and H 2 0 (200 mL) . The 
organic layer was sequentially washed with H 2 0 (2 x 200 mL), a saturated NaHC0 3 
solution (200 mL), and a saturated NaCl solution (200 mL), dried (Na^OJ, and 

10 concentrated in vacuo. The residue was triturated (EtjO/hexane) to afford 1- 
methoxy-4-(4-nitrophenoxy)benzene (12.2 g, 100%): 'H-NMR (CDC1 3 ) 5 3.83 (s, 
3H), 6.93-7.04 (m, 6H), 8.18 (d, .7=9.2 Hz, 2H); EI-MS m/z 245 (M + ). 




15 Step 2. 4-(4-Methoxyphenoxy)aniline: To a solution of 1 -methoxy-4-(4- 
nitrophenoxy)benzene (12.0 g, 49 mmol) in EtOAc (250 mL) was added 5% Pt/C 
(1.5 g) and the resulting slurry was shaken under a H 2 atmosphere (50 psi) for 18 h. 
The reaction mixture was filtered through a pad of Celite® with the aid of EtOAc and 
concentrated in vacuo to give an oil which slowly solidified (10.6 g, 100%): 'H-NMR 

20 (CDC1 3 ) 8 3.54 (br s, 2H), 3.78 (s, 3H), 6.65 (d, J-8.8 Hz, 2H), 6.79-6.92 (m, 6H); EI- 
MS m/z 215 (M + ). 



A13b. General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 



25 




Step 1. 3-(Trifluoromethyl)-4-(4-pyridinylthio)nitrobenzene: A solution of 4- 
mercaptopyridine (2.8 g, 24 mmoles), 2-fluoro-5-nitrobenzotrifluoride (5 g, 23.5 
mmoles), and potassium carbonate (6.1 g, 44.3 mmoles) in anhydrous DMF (80 mL) 
was stirred at room temperature and under argon overnight. TLC showed complete 



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reaction. The mixture was diluted with Et z O (100 mL) and water (100 mL) and the 
aqueous layer was back-extracted with E^O (2 x 100 mL). The organic layers were 
washed with a saturated NaCl solution (100 mL), dried (MgS0 4 ), and concentrated 
under reduced pressure. The solid residue was triturated with EtjO to afford the 
desired product as a tan solid (3.8 g, 54%): TLC (30% EtOAc/70% hexane) 1^0.06; 
'H-NMR (DMSO-d 6 ) 8 7.33 (dd, .7=1.2, 4.2 Hz, 2H), 7.78 (d, .7=8.7 Hz, 1H), 8.46 (dd, 
.7=2.4, 8.7Hz, 1H), 8.54-8.56 (m, 3H). 

CF 3 




H 2 N 

Step 2. 3-(Trifluoromethyl)-4-(4-pyridinylthio)aniline: A slurry of 3- 
10 trifluoromethyl-4-(4-pyridinylthio)nitrobenzene (3.8 g, 12.7 mmol), iron powder (4.0 
g, 71.6 mmol), acetic acid (100 mL), and water (1 mL) were stirred at room temp, for 
4 h. The mixture was diluted with Et 2 0 (100 mL) and water (100 mL). The aqueous 
phase was adjusted to pH 4 with a 4 N NaOH solution. The combined organic layers 
were washed with a saturated NaCl solution (100 mL), dried (MgS0 4 ), and 
1 5 concentrated under reduced pressure. The residue was filtered through a pad of silica 
(gradient from 50% EtOAc/50% hexane to 60% EtOAc/40% hexane) to afford the 
desired product (3.3 g): TLC (50% EtOAc/50% hexane) R, 0.10; 'H-NMR (DMSO-d 6 ) 
6 6.21 (s, 2H), 6.84-6.87 (m, 3H), 7.10 (d, .7=2.4 Hz, 1H), 7.39 (d, 7=8.4 Hz, 1H), 8.29 
(d, .7=6.3 Hz, 2H). 

20 

A13c. General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 

0 2 N \^ 

6 

Step 1. 4-(2-(4-Phenyl)thiazolyl)thio-l-nitrobenzene: A solution of 2-mercapto-4- 
25 phenylthiazole (4.0 g, 20.7 mmoles) in DMF (40 mL) was treated with l-fluoro-4- 
nitrobenzene (2.3 mL, 21.7 mmoles) followed by K 2 C0 3 (3.18 g, 23 mmol), and the 
mixture was heated at approximately 65 °C overnight. The reaction mixture was then 
diluted with EtOAc (100 mL), sequentially washed with water (100 mL) and a 



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5 



saturated NaCl solution (100 mL), dried (MgS0 4 ) and concentrated under reduced 
pressure. The solid residue was triturated with a EtjO/hexane solution to afford the 
desired product (6.1 g): TLC (25% EtOAc/75% hexane) R^O.49; 'H-NMR (CDC1 3 ) S 
7.35-7.47 (m, 3H), 7.58-7.63 (m, 3H), 7.90 (d, 7=6.9 Hz, 2H), 8.19 (d, J=9.0 Hz, 2H). 



H 2 N 



Step 2, 4-(2-(4-Phenyl)thiazolyI)thioaniline: 4-(2-(4-Phenyl)thiazolyl)thio-l -nitro- 
benzene was reduced in a manner analagous to that used in the preparation of 3- 
(trifluoromethyl)-4-(4-pyridinylthio)aniline: TLC (25% EtOAc/75% hexane) 0.18; 
'H-NMR (CDC1 3 ) 6 3.89 (br s, 2H), 6.72-6.77 (m, 2H), 7.26-7.53 (m, 6H), 7.85-7.89 
10 (m, 2H). 



A13d. General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 




15 Step 1. 4-(6-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 5-hydroxy- 
2-methylpyridine (5.0 g, 45.8 mmol) and 1 -fluoro-4-nitrobenzene (6.5 g, 45.8 mmol) 
in anh DMF (50 mL) was added K 2 C0 3 (13.0 g, 91.6 mmol) in one portion. The 
mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool 
to room temp. The resulting mixture was poured into water (200 mL) and extracted 

20 with EtOAc (3 x 150 mL). The combined organics were sequentially washed with 
water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na^OJ, and 
concentrated in vacuo to afford the desired product (8.7 g, 83%). The this material 
was carried to the next step without further purification. 




25 Step 2. 4-(6-Methyl-3-pyridinyloxy)aniline: A solution of 4-(6-methyl-3- 

pyridinyloxy)-! -nitrobenzene (4.0 g, 17.3 mmol) in EtOAc (150 mL) was added to 



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10% Pd/C (0.500 g, 0.47 mmol) and the resulting mixture was placed under a H 2 
atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was 
then filtered through a pad of Celite® and concentrated in vacuo to afford the desired 
product as a tan solid (3.2 g, 92%): EI-MS m/z 200 (M+). 

, General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 



Step 1. 4-(3,4-Dimethoxyphenoxy)-l-nitrobenzene: To a solution of 3,4- 
dimethoxyphenol (1.0 g, 6.4 mmol) and l-fluoro-4-nitrobenzene (700 ^L, 6.4 mmol) 
in anh DMF (20 mL) was added K 2 C0 3 (1.8 g, 12.9 mmol) in one portion. The 
mixture was heated at the reflux temp with stirring for 1 8 h and then allowed to cool 
to room temp. The mixture was then poured into water (100 mL) and extracted with 
EtOAc (3 x 100 mL). The combined organics were sequentially washed with water (3 
x 50 mL) and a saturated NaCl solution (2 x 50 mL), dried (NaaSOJ, and concentrated 
in vacuo to afford the desired product (0.8 g, 54%). The crude product was carried to 
the next step without further purification. 



Step 2. 4-(3,4-Dimethoxyphenoxy)aniIine: A solution of 4-(3,4-dimethoxy- 
phenoxy)-l -nitrobenzene (0.8 g, 3.2 mmol) in EtOAc (50 mL) was added to 10% 
Pd/C (0.100 g) and the resulting mixture was placed under a H 2 atmosphere (balloon) 
and was allowed to stir for 1 8 h at room temp. The mixture was then filtered through 
a pad of Celite® and concentrated in vacuo to afford the desired product as a white 
solid (0.6 g, 75%): EI-MS m/z 245 (M+). 

• General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 






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Step 1. 3-(3-Pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxypyridine 
(2.8 g, 29.0 mmol), l-bromo-3-nitrobenzene (5.9 g, 29.0 mmol) and copper® 
bromide (5.0 g, 34.8 mmol) in anh DMF (50 mL) was added K 2 C0 3 (8.0 g, 58.1 
mmol) in one portion. The resulting mixture was heated at the reflux temp, with 

5 stirring for 1 8 h and then allowed to cool to room temp. The mixture was then poured 
into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined organics 
were sequentially washed with water (3 x 1 00 mL) and a saturated NaCl solution (2 x 
100 mL), dried (NajSOJ, and concentrated in vacuo. The resulting oil was purified 
by flash chromatography (30% EtO Ac/70% hexane) to afford the desired product (2.0 

10 g, 32 %). This material was used in the next step without further purification. 




Step 2. 3-(3-PyridinyIoxy)aniIine: A solution of 3-(3-pyridinyloxy)-l- 

nitrobenzene (2.0 g, 9.2 mmol) in EtOAc (100 mL) was added to 10% Pd/C (0.200 g) 
and the resulting mixture was placed under a H 2 atmosphere (balloon) and was 
15 allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of 
Celite® and concentrated in vacuo to afford the desired product as a red oil (1.6 g, 
94%): EI-MS m/z 186 (M + ). 

A13g. General Method for Substituted Aniline Formation via Nitroarene Formation 
20 Through Nucleophilic Aromatic Substitution, Followed by Reduction 




Stepl. 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxy- 
5-methylpyridine (5.0 g, 45.8 mmol), l-bromo-3 -nitrobenzene (12.0 g, 59.6 mmol) 
and copper® iodide (10.0 g, 73.3 mmol) in anh DMF (50 mL) was added K 2 C0 3 
25 (13.0 g, 91.6 mmol) in one portion. The mixture was heated at the reflux temp, with 
stirring for 18 h and then allowed to cool to room temp. The mixture was then poured 
into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined organics 
were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 
100 mL), dried (Na^OJ, and concentrated in vacuo . The resulting oil was purified 

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by flash chromatography (30% EtO Ac/70% hexane) to afford the desired product (1.2 



Step 2. 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: A solution of 3-(5-methyl-3- 
5 pyridinyloxy)-l -nitrobenzene (1.2 g, 5.2 mmol) in EtOAc (50 mL) was added to 10% 
Pd/C (0.100 g) and the resulting mixture was placed under a H 2 atmosphere (balloon) 
and was allowed to stir for 18 h at room temp. The mixture was then filtered through 



A13h. General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 



Step 1. 5-Nitro-2-(4-methylphenoxy)pyridine: To a solution of 2-chloro-5- 
15 nitropyridine (6.34 g, 40 mmol) in DMF (200 mL) were added of 4-methylphenol (5.4 
g, 50 mmol, 1.25 equiv) and K 2 C0 3 (8.28 g, 60 mmol, 1.5 equiv). The mixture was 
stirred overnight at room temp. The resulting mixture was treated with water (600 
mL) to generate a precipitate. This mixture was stirred for 1 h, and the solids were 
separated and sequentially washed with a 1 N NaOH solution (25 mL), water (25 mL) 
20 and pet ether (25 mL) to give the desired product (7.05 g, 76%): mp 80-82 °C; TLC 
(30% EtOAc/70% pet ether) R, 0.79; 'H-NMR (DMSO-d 6 ) 5 2.31 (s, 3H), 7.08 (d, 
J=8.46 Hz, 2H), 7.19 (d, J=9.20 Hz, 1H), 7.24 (d, J=8.09 Hz, 2H), 8.58 (dd, J=2.94, 
8.82 Hz, 1H), 8.99 (d, J=2.95 Hz, 1H); FAB-MS m/z (rel abundance) 231 ((M+H) + ), 
100%). 



g, 13%). 




a pad of Celite® and concentrated in vacuo to afford the desired product as a red oil 
(0.9 g, 86%): CI-MS m/z 201 ((M+H) + ). 




25 




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Step 2. 5-Amino-2-(4-methyIphenoxy)pyridine Dihydrochloride: A solution 5- 
nitro-2-(4-methylphenoxy)pyridine (6.94 g, 30 mmol, 1 eq) and EtOH (10 mL) in 
EtOAc (190 mL) was purged with argon then treated with 10% Pd/C (0.60 g). The 
reaction mixture was then placed under a H 2 atmosphere and was vigorously stirred 
for 2.5 h. The reaction mixture was filtered through a pad of Celite®. A solution of 
HC1 in Et 2 0 was added to the filtrate was added dropwise. The resulting precipitate 
was separated and washed with EtOAc to give the desired product (7.56 g, 92%): mp 
208-210 °C (dec); TLC (50% EtOAc/50% pet ether) 0.42; *H-NMR (DMSO-d 6 ) 6 
2.25 (s, 3H), 6.98 (d, J-8.45 Hz, 2H), 7.04 (d, J=8.82 Hz, 1H), 7.19 (d, J=8.09 Hz, 
2H), 8.46 (dd, J=2.57, 8.46 Hz, 1H), 8.63 (d, 7=2.57 Hz, 1H); EI-MS m/z (rel 
abundance) (M\ 100%). 

General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 



Step 1. 4-(3-Thienylthio)-l-nitrobenzene: To a solution of 4-nitrothiophenol 
(80%pure; 1.2 g, 6.1 mmol), 3-bromothiophene (1.0 g, 6.1 mmol) and copper(II) 
oxide (0.5 g, 3.7 mmol) in anhydrous DMF (20 mL) was added KOH (0.3 g, 6.1 
mmol), and the resulting mixture was heated at 130 °C with stirring for 42 h and then 
allowed to cool to room temp. The reaction mixture was then poured into a mixture 
of ice and a 6N HC1 solution (200 mL) and the resulting aqueous mixture was 
extracted with EtOAc (3 x 100 mL). The combined organic layers were sequentially 
washed with a 1M NaOH solution (2 x 100 mL) and a saturated NaCl solution (2 x 
100 mL), dried (MgSO A ), and concentrated in vacuo . The residual oil was purified by 
MPLC (silica gel; gradient from 10% EtO Ac/90% hexane to 5% EtO Ac/95% hexane) 
to afford of the desired product (0.5 g, 34%). GC-MS m/z 237 (M + ). 



H 2 N ^ 

Step 2. 4-(3-Thienylthio)aniline: 4-(3-Thienylthio)-l -nitrobenzene was reduced to 
the aniline in a manner analogous to that described in Method Bl . 





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A13j. General Method for Substituted Aniline Formation via Nitroarene 
Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction 




H 2 N 

5 4-(5-Pyrimininyloxy)aniline: 4-Aminophenol (1.0 g, 9.2 mmol) was dissolved in 
DMF (20 mL) then 5-bromopyrimidine (1.46 g, 9.2 mmol) and K2CO3 (1.9 g, 13.7 
mmol) were added. The mixture was heated to 100 °C for 18 h and at 130 °C for 48 h 
at which GC-MS analysis indicated some remaining starting material. The reaction 
mixture was cooled to room temp, and diluted with water (50 mL). The resulting 

10 solution was extracted with EtOAc (100 mL). The organic layer was washed with a 
saturated NaCl solution (2 x 50 mL), dried (MgS0 4 ), and concentrated in vacuo. The 
residular solids were purified by MPLC (50% EtOAc/50% hexanes) to give the 
desired amine (0.650 g, 38%). 



lA13k- General Method for Substituted Aniline Formation via Nitroarene Formation 
Through Nucleophilic Aromatic Substitution, Followed by Reduction 



25 




OMe 

Step 1. 5-Bromo-2-methoxypyridine: A mixture of 2,5-dibromopyridine (5.5 g, 
23.2 mmol) and NaOMe (3.76g, 69.6 mmol) in MeOH (60 mL) was heated at 70 °C 
20 in a sealed reaction vessel for 42 h, then allowed to cool to room temp. The reaction 
mixture was treated with water (50 mL) and extracted with EtOAc (2 x 100 mL). The 
combined organic layers were dried (Na^Q,) and concentrated under reduced 
pressure to give a pale yellow, volatile oil (4.1g, 95% yield): TLC (10% EtOAc / 90% 
hexane) 0.57. 




HO — k v^OMe 



Step 2. 5-Hydroxy-2-methoxypyridine: To a stirred solution of 5-bromo-2- 
methoxypyridine (8.9 g, 47.9 mmol) in THF (175 mL) at -78 °C was added an n- 
butyllithium solution (2.5 M in hexane; 28.7 mL, 71.8 mmol) dropwise and the 
resulting mixture was allowed to stir at -78 °C for 45 min. Trimethyl borate (7.06 



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10 



mL, 62.2 mmol) was added via syringe and the resulting mixture was stirred for an 
additional 2 h. The bright orange reaction mixture was warmed to 0 °C and was 
treated with a mixture of a 3 N NaOH solution (25 mL, 71.77 mmol) and a hydrogen 
peroxide solution (30%; approx. 50 mL). The resulting yellow and slightly turbid 
reaction mixture was warmed to room temp, for 30 min and then heated to the reflux 
temp, for 1 h. The reaction mixture was then allowed to cool to room temp. The 
aqueous layer was neutralized with a IN HC1 solution then extracted with E^O (2 x 
100 mL). The combined organic layers were dried (Na^OJ and concentrated under 
reduced pressure to give a viscous yellow oil (3.5g, 60%). 




0 2 N N OMe 

Step 3. 4-(5-(2-Methoxy)pyridyl)oxy-l-nitrobenzene: To a stirred slurry of NaH 
(97%, 1.0 g, 42 mmol) in anh DMF (100 mL) was added a solution of 5-hydroxy-2- 
methoxypyridine (3.5g, 28 mmol) in DMF (100 mL). The resulting mixture was 
allowed to stir at room temp, for 1 h, 4-fluoronitrobenzene (3 mL, 28 mmol) was 
1 5 added via syringe. The reaction mnixture was heated to 95 °C overnight, then treated 
with water (25 mL) and extracted with EtOAc (2 x 75 mL). The organic layer was 
dried (MgS0 4 ) and concentrated under reduced pressure. The residual brown oil was 
crystalized EtOAc/hexane) to afford yellow crystals (5.23 g, 75%). 




HoN" OMe 




20 Step 4, 4-(5-(2-Methoxy)pyridyl)oxyaniline: 4-(5-(2-Methoxy)pyridyl)oxy-l- 
nitrobenzene was reduced to the aniline in a manner analogous to that described in 
Method B3d, Step2. 



A14a. General Method for Substituted Aniline Synthesis via Nucleophilic Aromatic 
25 Substitution using a Halopyridine 




3_(4-Pyridinylthio)aniline: To a solution of 3-aminothiophenol (3.8 mL, 34 mmoles) 
in anh DMF (90mL) was added 4-chloropyridine hydrochloride (5.4 g, 35.6 mmoles) 
followed by K 2 C0 3 (16.7 g, 121 mmoles). The reaction mixture was stirred at room 



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temp, for 1.5 h, then diluted with EtOAc (100 mL) and water (lOOmL). The aqueous 
layer was back-extracted with EtOAc (2 x 100 mL). The combined organic layers 
were washed with a saturated NaCl solution (100 mL), dried (MgS0 4 ), and 
concentrated under reduced pressure. The residue was filtered through a pad of silica 
(gradient from 50% EtOAc/50% hexane to 70% EtOAc/30% hexane) and the resulting 
material was triturated with a Et z O/hexane solution to afford the desired product (4.6 
g, 66%): TLC (100 % ethyl acetate) R^- 0.29; 'H-NMR (DMSO-d 6 ) 8 5.41 (s, 2H), 
6.64-6.74 (m, 3H), 7.01 (d, J=4.8, 2H), 7.14 (t, J=7.8 Hz, 1H), 8.32 (d, J=4.8, 2H). 

. General Method for Substituted Aniline Synthesis via Nucleophilic Aromatic 
Substitution using a Halopyridine 



4-(2-Methyl-4-pyridinyIoxy)aniline: To a solution of 4-aminophenol (3.6 g, 32.8 
mmol) and 4-chloropicoline (5.0 g, 39.3 mmol) in anh DMPU (50 mL) was added 
potassium tert-butoxide (7.4 g, 65.6 mmol) in one portion. The reaction mixture was 
heated at 100 °C with stirring for 18 h, then was allowed to cool to room temp. The 
resulting mixture was poured into water (200 mL) and extracted with EtOAc (3 x 150 
mL). The combined extracts were sequentially washed with water (3 x 100 mL) and a 
saturated NaCl solution (2 x 100 mL), dried (NajSO^, and concentrated in vacuo. 
The resulting oil was purified by flash chromatography (50 % EtO Ac/50% hexane) to 
afford the desired product as a yellow oil (0.7 g, 9%): CI-MS m/z 201 ((M+H) + ). 

A14c. General Method for Substituted Aniline Synthesis via Nucleophilic 
Aromatic Substitution using a Halopyridine 



Step 1. Methyl(4-nitrophenyl)-4-pyridylamine: To a suspension of iV-methyl-4- 
nitroaniline (2.0 g, 13.2 mmol) and K 2 C0 3 (7.2 g, 52.2 mmol) in DMPU (30mL) was 
added 4-chloropyridine hydrochloride (2.36 g, 15.77 mmol). The reaction mixture 





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was heated at 90 °C for 20 h, then cooled to room temperature. The resulting mixture 
was diluted with water (100 mL) and extracted with EtOAc (100 mL). The organic 
layer was washed with water (100 mL), dried (Na^OJ and concentrated under 
reduced pressure. The residue was purified by column chromatography (silica gel, 
5 gradient from 80% EtOAc /20% hexanes to 100% EtOAc) to afford methyl(4- 
nitrophenyl)-4-pyridylamine (0.42 g) 



Step 2. Methyl(4-aminophenyl)-4-pyridylamine: Methyl(4-nitrophenyl)-4- 



A15. General Method of Substituted Aniline Synthesis via Phenol Alkylation 
Followed by Reduction of a Nitroarene 



Step 1. 4-(4-Butoxyphenyl)thio-l-nitrobenzene: To a solution of 4-(4-nitrophenyl- 
15 thio)phenol (1.50 g, 6.07 mmol) in anh DMF (75 ml) at 0 °C was added NaH (60% in 
mineral oil, 0.267 g, 6.67 mmol). The brown suspension was stirred at 0 °C until gas 
evolution stopped (15 min), then a solution of iodobutane (1.12 g, .690 ml, 6.07 
mmol) in anh DMF (20 mL) was added dropwise over 15 min at 0 °C. The reaction 
was stirred at room temp, for 18 h at which time TLC indicated the presence of 
20 unreacted phenol, and additional iodobutane (56 mg, 0.035 mL, 0.303 mmol, 0.05 
equiv) and NaH (13 mg, 0.334 mmol) were added. The reaction was stirred an 
additional 6 h room temp., then was quenched by the addition of water (400 mL). The 
resulting mixture was extracted with Et 2 0 (2 x 500 mL). The combibed organics were 
washed with water (2 x 400 mL), dried (MgSOJ, and concentrated under reduced 
25 pressure to give a clear yellow oil, which was purified by silica gel chromatography 
(gradient from 20% EtOAc/80% hexane to 50% EtOAc/50% hexane) to give the 
product as a yellow solid (1.24 g, 67%): TLC (20% EtOAc/80% hexane) R^O.75; , H- 
NMR (DMSO-d 6 ) 8 0.92 (t, J= 7.5 Hz, 3H), 1.42 (app hex, J=7.5 Hz, 2H), 1.70 (m, 




pyridylamine was reduced in a manner analogous to that described in Method Bl. 



10 




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2H), 4.01 (t, ./= 6.6 Hz, 2H), 7.08 (d, J=8J Hz, 2H), 7.17 (d, J=9 Hz, 2H), 7.51 (d, 
J= 8.7 Hz, 2H), 8.09 (d, J= 9 Hz, 2H). 

S 




Step 2. 4-(4-ButoxyphenyI)thioaniIine: 4-(4-Butoxyphenyl)thio-l -nitrobenzene was 
5 reduced to the aniline in a manner analagous to that used in the preparation of 3- 
(trifiuoromethyl)-4-(4-pyridinylthio)aniline (Method B3b, Step 2): TLC (33% 
EtOAc/77% hexane) R^.0.38. 

A16. General Method for Synthesis of Substituted Anilines by the Acylation of 
10 Diaminoarenes 



l-UN 




4-(4-ter^Butoxycarbamoylbenzyl)aniline: To a solution of 4,4'-methylenedianiline 
(3.00 g, 15.1 mmol) in anh THF (50 mL) at room temp was added a solution of di- 
tert-butyl dicarbonate (3.30 g, 15.1 mmol) in anh THF (10 mL). The reaction 
15 mixture was heated at the reflux temp, for 3 h, at which time TLC indicated the 
presence of unreacted methylenedianiline. Additional di-terf-butyl dicarbonate (0.664 

g, 3.03 mmol, 0.02 equiv) was added and the reaction stirred at the reflux temp, for 16 

h. The resulting mixture was diluted with Et^O (200 mL), sequentially washed with a 
saturated NaHC0 3 solution (100 ml), water (100 mL) and a saturated NaCl solution 

20 (50 mL), dried (MgS04), and concentrated under reduced pressure. The resulting 
white solid was purified by silica gel chromatography (gradient from 33% 
EtOAc/67% hexane to 50% EtOAc/50% hexane) to afford the desired product as a 
white solid ( 2.09 g, 46%): TLC (50% EtOAc/50% hexane) IL- 0.45; 'H-NMR 
(DMSO-d 6 ) 8 1.43 (s, 9H), 3.63 (s, 2H), 4.85 (br s, 2H), 6.44 (d, J=8.4 Hz, 2H), 

25 6.80 (d, J=8.1 Hz, 2H), 7.00 (d, J=8.4 Hz, 2H), 7.28 (d, J=S. 1 Hz, 2H), 9.18 (br s, 
1H); FAB-MS m/z 298 (M + ). 

A17. General Method for the Synthesis of Aryl Amines via Electrophilic Nitration 
Followed by Reduction 



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0 2 N 




10 



Step 1. 3-(4-Nitrobenzyl)pyridine: A solution of 3-benzylpyridine (4.0 g, 

23.6 mmol) and 70% nitric acid (30 mL) was heated overnight at 50 °C. The resulting 
mixture was allowed to cool to room temp, then poured into ice water (350 mL). The 
aqueous mixture then made basic with a IN NaOH solution, then extracted with E^O 
(4 x 100 mL). The combined extracts were sequentially washed with water (3 x 100 
mL) and a saturated NaCl solution (2 x 100 mL), dried (N^SOJ, and concentrated in 
vacuo. The residual oil was purified by MPLC (silica gel; 50 % EtOAc/50% hexane) 
then recrystallization (EtOAc/hexane) to afford the desired product (1.0 g, 22%): GC- 
MS m/z 214 (M + ). 



H-jN 




Step 2. 3-(4-Pyridinyl)methylaniline: 3-(4-Nitrobenzyl)pyridine was reduced to the 
aniline in a manner analogous to that described in Method B 1 . 



1A18. General Method for Synthesis of Aryl Amines via Substitution with Nitrobenzyl 
Halides Followed by Reduction 




Step 1. 4-(l-ImidazoIylmethyl)-l-nitrobenzene: To a solution of imidazole (0.5 g, 
7.3 mmol) and 4-nitrobenzyl bromide (1 .6 g, 7.3 mmol) in anh acetonitrile (30 mL) 

20 was added K 2 C0 3 (1.0 g, 7.3 mmol). The resulting mixture was stirred at rooom 
temp, for 1 8 h and then poured into water (200 mL) and the resulting aqueous solution 
wasextracted with EtOAc (3 x 50 mL). The combined organic layers were 
sequentially washed with water (3 x 50 mL) and a saturated NaCl solution (2 x 50 
mL), dried (MgS0 4 ), and concentrated in vacuo. The residual oil was purified by 

25 MPLC (silica gel; 25% EtO Ac/75% hexane) to afford the desired product (1.0 g, 
91%): EI-MS m/z 203 (M + ). 



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Step 2. 4-(l-ImidazoIylmethyl)aniline: 4-(l -Imidazolylmethyl)- 1 -nitrobenzene was 
reduced to the aniline in a manner analogous to that described in Method B2. 



A19. Formation of Substituted Hydroxymethylanilines by Oxidation of Nitrobenzyl 



10 



15 



20 



Compounds Followed by Reduction 



OH 




0 2 N 

Step 1. 4-(l-Hydroxy-l-(4-pyridyl)methyl-l-nitrobenzene: To a stirred solution 
of 3-(4-nitrobenzyl)pyridine (6.0 g, 28 mmol) in CH 2 C1 2 (90 mL) was added m-CPBA 
(5.80 g, 33.6 mmol) at 10 °C, and the mixture was stirred at room temp, overnight. 
The reaction mixture was successively washed with a 10% NaHS0 3 solution (50 mL), 
a saturated K 2 C0 3 solution (50 mL) and a saturated NaCl solution (50 mL), dried 
(MgS0 4 ) and concentrated under reduced pressure. The resulting yellow solid (2.68 
g) was dissolved in anh acetic anhydride (30 mL) and heated at the reflux temperature 
overnight. The mixture was concentrated under reduced pressure. The residue was 
dissolved in MeOH (25 mL) and treated with a 20% aqueous NH 3 solution (30 mL). 
The mixture was stirred at room temp, for 1 h, then was concentrated under reduced 
pressure. The residue was poured into a mixture of water (50 mL) and CH 2 C1 2 (50 
mL). The organic layer was dried (MgS0 4 ), concentrated under reduced pressure, and 
purified by column chromatography (80% EtOAc/ 20% hexane) to afford the desired 
product as a white solid. (0.53 g, 8%): mp 110-118 °C; TLC (80% EtOAc/20% 
hexane) 0.12; FAB-MS m/z 367 ((M+H) + , 100%). 



25 



OH 




H 2 N 

Step 2. 4-(l-Hydroxy-l-(4-pyridyl)methylaniline: 4-(l -Hydroxy- l-(4-pyridyl)- 
methyl-1 -nitrobenzene was reduced to the aniline in a manner analogous to that 
described in Method B3d, Step2. 



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A20. Formation of 2-(W-methylcarbamoyl)pyridines via the Menisci reaction 

O 

Step 1. 2-(iV-methylcarbamoyl)-4-chloropyridine. (Caution: this is a highly 
hazardous, potentially explosive reaction.) To a solution of 4-chloropyridine (10.0 g) 
in N-methylformamide (250 mL) under argon at ambient temp was added cone. H 2 S0 4 
(3.55 mL) (exotherm). To this was added H 2 0 2 (17 mL, 30% wt in H20) followed 
by FeS0 4 7H20 (0.55 g) to produce an exotherm. The reaction was stirred in the dark 
at ambient temp for lh then was heated slowly over 4 h at 45 °C. When bubbling 
subsided,the reaction was heated at 60 °C for 16 h. The opaque brown solution was 
diluted with H20 (700 mL) followed by a 10% NaOH solution (250 mL). The 
aqueous mixture was extracted with EtOAc (3 x 500 mL) and the organic layers were 
washed separately with a saturated NaCl solution (3 x 150 mlL. The combined 
organics were dried (MgS0 4 ) and filtered through a pad of silica gel eluting with 
EtOAc. The solvent was removed in vacuo and the brown residue was purified by 
silica gel chromatography (gradient from 50% EtOAc / 50% hexane to 80% EtOAc / 
20% hexane). The resulting yellow oil crystallized at 0 °C over 72 h to give 2-(N- 
methylcarbamoyl)-4-chloropyridine in yield (0.61 g, 5.3%): TLC (50% EtOAc/50% 
hexane) % 0.50; MS; 'H NMR (CDC1 3 ): d 8.44 (d, 1 H, J = 5.1 Hz, CBN), 8.21 (s, 
1H, CHCCO), 7.96 (b s, 1H, NH), 7.43 (dd, 1H, J = 2.4, 5.4 Hz, C1CHCN), 3.04 (d, 
3H, J = 5.1 Hz, methyl); CI-MS m/z 171 ((M+H)+). 

A2 1 . Generalmethod for the Synthesis of (D-Sulfonylphenyl Anilines 

0 2 N 

Step 1. 4-(4-Methylsulfonylphenoxy)-l-nitrobenzene: To a solution of 4-(4- 
methylthiophenoxy)-l-ntirobenzene (2 g, 7.66 mmol) in CH 2 C1 2 (75 mL) at 0 °C was 
slowly added wiCPBA (57-86%, 4 g), and the reaction mixture was stirred at room 
temperature for 5 h. The reaction mixture was treated with a 1 N NaOH solution (25 
mL). The organic layer was sequentially washed with a IN NaOH solution (25 mL), 




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water (25 mL) and a saturated NaCl solution (25 mL), dried (MgS0 4 ), and 
concentrated under reduced pressure to give 4-(4-methylsulfonylphenoxy)-l- 
nitrobenzene as a solid (2.1 g). 

Step 2. 4-(4-MethylsuIfonylphenoxy)-l-aniIine: 4-(4-Methylsulfonylphenoxy)-l- 
nitrobenzene was reduced to the aniline in a manner anaologous to that described in 
Method B3d, step 2. 

A22. General Method for Synthesis of co-Alkoxy-co-carboxyphenyl Anilines 

O 




Step 1. 4-(3-Methoxycarbonyl-4-methoxyphenoxy)-l-nitrobenzene: To a solution 
of -(3-carboxy-4-hydroxyphenoxy)-l-nitrobenzene (prepared in a manner analogous 
to that described in Method B3a, step 1, 12 mmol) in acetone (50 mL) was added 
K 2 C0 3 (5 g) and dimethyl sulfate (3.5 mL). The resulting mixture was heated aaaaaat 
the reflux tempoerature overnight, then cooled to room temperature and filtered 
through a pad of Celite® The resulting solution was concentrrated under reduced 
pressure, absorbed onto silica gel, and purified by column chromatography (50% 
EtOAc / 50% hexane) to give 4-(3-methoxycarbonyl-4-methoxyphenoxy)-l- 
nitrobenzene as a yellow powder (3 g): mp 115 118 °C. 



O 




Step 2. 4-(3-Carboxy-4-methoxyphenoxy)-l-nitrobenzene: A mixture of 4-(3- 
methoxycarbonyl-4-methoxyphenoxy)-l -nitrobenzene (1.2 g), KOH (0.33 g),and 
water (5 mL) in MeOH (45 mL) was stirred at room temperature overnight and then 
heated at the reflux temperature for 4 h. The resulting mixture was cooled to room 
temperature and concentrated under reduced pressure. The residue was dissolved in 
water (50 mL), and the aqueous mixture was made acidic with a IN HC1 solution. 
The resulting mixture was extracted with EtOAc (50 mL). The organic layer was 



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dried (MgS0 4 ) and concentrated under reduced pressure to give 4-(3-carboxy-4- 
methoxyphenoxy)-! -nitrobenzene (1.04 g). 

B. General Methods of Urea Formation 

Bla. General Method for the Reaction of an Aryl Amine with an Aryl 
Isocyanate 



A^-(5-^r/-Butyl-2-(3-tetrahydrofuranyloxy)phenyl)-iV , -(4-methylphenyl)urea: To 

a solution of 5-^rr-butyl-2-(3-tetrahydrofuranyloxy)aniline (0.078 g, 0.33 mmol) in 
toluene (2.0 mL) was added /?-tolyl isocyanate (0.048 g, 0.36 mmol) and the resulting 
mixture was allowed to stir at room temp, for 8 h to produce a precipitate. The 
reaction mixture was filtered and the residue was sequentially washed with toluene 
and hexanes to give the desired urea as a white solid (0.091 g, 75%): mp 229-231 °C; 
'H-NMR (DMSO-d 6 ) 6 1.30 (s, 9H), 1.99-2.03 (m, 1H), 2.19-2.23 (m, 4H), 3.69-3.76 
(m, 1H), 3.86-3.93 (m, 3H), 4.98-5.01 (m, 1H), 6.81-6.90 (m, 2H), 7.06 (d, J=S.09 Hz, 
2H, 7.32 (d, J=8.09 Hz, 2H), 7.84 (s, 1H), 8.22 (d, J=2.21 Hz, 1H), 9.26 (s, 1H). 

Bib. General Method for the Reaction of an Aryl Amine with an Aryl 
Isocyanate 



^-(l-Methoxy-S-^rifluoromethanesulfonyOphenyO-TVX^methylphenyOurea: p- 

Tolyl isocyanate (0.19 mL, 1.55 mmol) was added to a solution of 2-methoxy-5- 
(trifluoromethanesulfonyl)aniline (0.330 g> 1.29 mmol) in EtOAc (5 mL), and the 




CF 3 

o=s=o 




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reaction mixture was stirred at room temp, for 1 8 h. The resulting precipitate was 
collected by filtration and washed with Et 2 0 to give a white solid (0.28 g). This 
material was then purified by HPLC (C-18 column, 50% CH 3 CN/50% H 2 0) and the 
resulting solids were triturated with Et 2 0 to provide the title compound (0.198 g): 1 H- 
5 NMR (CDC1 3 ) 5 7.08 (d, 7=8.5 Hz, 2H), 7.33 (d, J=8.5 Hz, 2H), 7.40 (d, J-8.8 Hz, 
1H), 7.71 (dd, J=2.6, 8.8 Hz, 1H), 8.66 (s, 1H), 8.90 (d, JK2.6 Hz, 1H), 9.36 (s, 1H); 
FAB-MS m/z 389 ((M+l) + )- 

Blc. General Method for the Reaction of an Aryl Amine with an Aryl 
10 Isocyanate 

CHF 2 

o=s=o 




A r -(2-Methoxy-5-(difluoromethanesuIfonyl)phenyl)-A^ , -(4-methylphenyI)urea: p- 

Tolyl isocyanate (0.058 mL, 0.46 mmol) was added to a solution of 2-methoxy-5- 
(difluoromethanesulfonyl)aniline (0.100 g, 0.42 mmol) in EtOAc (0.5 mL) and the 
15 resulting mixture was stirred at room temp, for 3 d. The resulting precipitate was 
filtered and washed with Et 2 0 to provide the title compound as a white solid (0.092 
g): 'H-NMR (CDCI3) 5 2.22 (s, 3H) 4.01 (s, 3H), 7.02-7.36 (m, 6H), 7.54 (dd, J=2.4, 
8.6 Hz, 1H), 8.57 (s, 1H), 8.79 (d, J=2.6 Hz, 1H), 9.33 (s, 1H); EI-MS m/z 370 (M + ). 

20 Bid, General Method for the Reaction of an Aryl Amine with an Aryl 
Isocyanate 




A^(2,4-Dimethoxy-5-(trifluoromethyl)phenyl)-A r, -(4-methylphenyl)urea: /?-Tolyl 
isocyanate (0.16 mL, 1.24 mmol) was added to a solution of 2,4-dimethoxy-5- 
25 (trifluoromethyl)aniline (0.25 g, 1.13 mmol) in EtOAc (3 mL) and the resulting 
mixture was stirred at room temp, for 18 h. A resulting precipitate was washed with 



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Et 2 0 to give the title compound as a white solid (0.36 g): 'H-NMR (CDC1 3 ) 5 2.21 (s, 
3H). 3.97 (s, 3H), 3.86 (s, 3H), 6.88 (s, 1H), 7.05 (d, J=8.5 Hz, 2H), 7.29 (d, J=8.5 
Hz, 2H), 8.13 (s, 1H), 8.33 (s, 1H), 9.09 (s, 1H); FAB-MS m/z 355 ((M+l) + ). 

Ble. General Method for the Reaction of an Aryl Amine with an Aryl 
Isocyanate 




^-(S-Methoxy-l-naphthylJ-A^'-Cl-naphthyOurea: To a solution of 2-amino-3- 
methoxynaphthalene (0.253 g, 1.50 mmol) in CH 2 C1 2 (3 mL) at room temp, was added 
a solution of 1-naphthyl isocyanate (0.247 g, 1.50 mmol) in CH 2 C1 2 (2 mL) and the 
resulting mixture was allowed to stir overnight. The resulting precipitate was 
separated and washed with CH 2 C1 2 to give the desired urea as a white powder (0.450 
g, 90%): mp 235-236 °C; 'H-NMR (DMSO-d 6 ) 8 4.04 (s, 3H), 7.28-7.32 (m, 2H), 
7.38 (s, 1H), 7.44-7.72 (m, 6H), 7.90-7.93 (m, 1H), 8.05-8.08 (m, 1H), 8.21-8.24 (m, 
1H), 8.64 (s, 1H), 9.03 (s, 1H), 9.44 (s, 1H); FAB-MS m/z 343 ((M+H) + ). 

Blf. General Method for the Reaction of an Aryl Amine with an Aryl 
Isocyanate 




7V-(5-^r/-Butyl-2-(2-rer^-butoxycarbonyloxy)ethoxy)phenyl)-A^-(4- 
methylphenyl)urea: A mixture of 5-terr-butyl-2-(2-terf- 

butoxycarbonyloxy)ethoxy)aniline (Method A10, 0.232 g, 0.75 mmol) and /?-tolyl 
isocyanate (0.099 mL, 0.79 mmol) in EtOAc (1 mL) was stirred at room temp, for 3 d 
to produce a solid, which was separated. The filtrate was purified by column 
chromatography (100% CH 2 C1 2 ) and the residue was triturated (Et 2 0/hexane) to give 



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the desired product (0.262 g, 79%): mp 155-156 °C; TLC (20% EtOAc/80% hexane) 
R^O.49; 'H-NMR (DMSO-d 6 ) 6 1.22 (s, 9H), 1.37 (s, 9H), 2.21 (s, 3H), 4.22-4.23 (m, 
2H), 4.33-4.35 (m, 2H), 6.89-7.00 (m, 4H), 7.06 (d, .7=8.5 Hz, 2H), 7.32 (d, .7=8.1 Hz, 
2H), 7.96 (s, 1H); 8.22 (d, .7=1.5 Hz, 1H), 9.22 (s, 1H); FAB-MS m/z (rel abundance) 
5 443 ((M+H) + , 6%). 

B2a. General Method for Reaction of an Aryl Amine with Phosgene Followed by 

Addition of a Second Aryl Amine 

CF, 



A^-(2-Methoxy-5-(trifluoromethyl)phenyl)-A r, -(3-(4-pyridinylthio)phenyl)urea: 

To a solution of pyridine (0.61 mL, 7.5 mmol, 3.0 equiv) and phosgene (20% in 
toluene; 2.65 mL, 5.0 mmol, 2.0 equiv) in CH 2 C1 2 (20 mL) was added 2-methoxy-5- 

15 (trifluoromethyl)aniline (0.48 g, 2.5 mmol) at 0 °C. The resulting mixture was 
allowed warm to room temp, stirred for 3 h, then treated with anh. toluene (100 mL) 
and concentrated under reduced pressure. The residue was suspended in a mixture of 
CH 2 C1 2 (10 mL) and anh. pyridine (10 mL) and treated with 3-(4-pyridinylthio)aniline 
(0.61 g, 2.5 mmol, 1.0 equiv). The mixture was stirred overnight at room temp., then 

20 poured into water (50 mL) and extracted with CH 2 C1 2 (3 x 25 mL). The combined 
organic layers were dried (MgS0 4 ) and concentrated under reduced pressure. The 
residue was dissolved in a minimal amount of CH 2 C1 2 and treated with pet. ether to 
give the desired product as a white precipitate (0.74 g, 70%): mp 202 °C; TLC (5% 
acetone/95% CH 2 C1 2 ) R^O.09; 'H-NMR (DMSO-de) 8 7.06 (d, .7=5.5 Hz, 2H), 7.18 

25 (dd, .7=2.4, 4.6 Hz, 2H), 7.3 1 (dd, J= 2.2, 9.2 Hz, 1H), 7.44 (d, .7=5.7 Hz, 1H), 7.45 (s, 
1H), 7.79 (d, .7=2.2 Hz, 1H), 8.37 (s, 2H), 8.50 (dd, 7=2.2, 9.2 Hz, 2H), 9.63 (s, 1H), 

9.84 (s, 1H); FAB-MS m/z 420 ((M+H)+, 70%). 

B2b. General Method for Reaction of an Aryl Amine with Phosgene Followed by 
30 Addition of a Second Aryl Amine 



10 




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CF 3 




A^-(2-Methoxy-5-(trifluoromethyI)phenyl)-A^ , -(4-(4-pyridinyIthio)phenyl)urea: To 

a solution of pyridine (0.61 mL, 7.5 mmol, 3.0 equiv) and phosgene (20% in toluene; 
2.65 mL, 5.0 mmol, 2.0 equiv) in CH 2 C1 2 (20 mL) was added 4-(4- 
pyridinylthio)aniline (0.506 g, 2.5 mmol) at 0 °C. After stirring for 3 h at room temp., 
the mixture was treated with anh. toluene (100 mL) then concentrated under reduced 
pressure. The residue was suspended in a mixture of CH 2 C1 2 (10 mL) and anh. 
pyridine (10 mL) and treated with 2-methoxy-5-(trifluoromethyl)aniline (0.50 g, 2.5 
mmol, 1.0 equiv). After stirring the mixture overnight at room temp., it was poured 
into a 1 N NaOH solution (50 mL) and extracted with CH 2 C1 2 (3 x 25 mL). The 
combined organic layers were dried (MgS0 4 ) and concentrated under reduced 
pressure to give the desired urea (0.74 g, 71%): mp 215 °C; TLC (5% acetone/95% 
CH 2 C1 2 ) IV 0.08; 'H-NMR (DMSO-d 6 ) 5 3.96 (s, 3H), 6.94 (dd, J=L1, 4.8 Hz, 2H), 
7.19 (d, J=8.4 Hz, 1H), 7.32 (dd, JN2.2, 9.3 Hz, 1H), 7.50 (d, J-8.8 Hz, 2H), 7.62 (d, 
J=8.8 Hz, 2H), 8.32 (d, J=5A Hz, 2H), 8.53 (d, J-0.7 Hz, 1H), 8.58 (s, 1H), 9.70 (s, 

1H); FAB-MS m/z 420 ((M+H) + ). 

General Method for the Reaction of an Aryl Amine with Phosgene with Isolation 
of the Isocyanate, Followed by Reaction with a Second Aryl Amine 

S0 2 CHF 2 



Step 1. 5-(Difluoromethanesulfonyl)-2-methoxyphenyl isocyanate: To a solution 
of phosgene (1.95 M in toluene; 3.0 mL, 5.9 mmol) in CH 2 C1 2 (40 mL) at 0 °C was 
added a solution of 5-(difluoromethanesulfonyl)-2-methoxyaniline (0.70 g, 2.95 
mmol) and pyridine (0.44 mL, 8.85 mmol) in CH 2 C1 2 (10 mL) dropwise. After being 
stirred at 0 °C for 30 min and at room temp, for 3 h, the reaction mixture was 
concentrated under reduced pressure, then treated with toluene (50 mL). The resulting 




MeO 



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mixture was concentrated under reduced pressure, then was treated with Et 2 0 (50 mL) 
to produce a precipitate (pyridinium hydrochloride). The resulting filtrate was 
concentrated under reduced pressure to provide the title compound as a white solid 
(0.33 g). This material was used in the next step without further purification. 



CHF 2 

o=s-o 




Step 2. 7V-(2-Methoxy-5-(difluoromethanesulfonyl)phenyl)-iV , -(2-fluoro-4- 
methylphenyl)urea: 2-Fluoro-4-methylaniline (0.022 mL, 0. 1 9 mmol) was added to 
a solution of 5-(difluoromethanesulfonyl)-2-methoxyphenyl isocyanate (0.046 g, 0.17 
mmol) in EtOAc (1 mL). The reaction mixture was stirred at room temp, for 3 d. The 
10 resulting precipitate was washed with Et 2 0 to provide the title compound as a white 
solid (0.055 g): *H-NMR (CDC1 3 ) 8 2.24 (s, 3H), 4.01 (s, 3H), 6.93 (d, J=8.5 Hz, 1H), 
7.01-7.36 (m, 3H), 7.56 (dd 5 7=2.4, 8.6 Hz, 1H), 7.98 (app t, J±&.6 Hz, 1H), 8.79 (d, 
J-2.2 Hz, 1H), 9.07 (s, 1H), 9.26 (s, 1H); FAB-MS m/z 389 ((M+l) + ). 



lB3b. General Method for the Reaction of an Aryl Amine with Phosgene with Isolation 
of the Isocyanate, Followed by Reaction with a Second Aryl Amine 

CF 3 




NCO 
MeO 

Step 1. 2-Methoxy-5-trifluoromethylphenyl Isocyanate: To a solution of 
phosgene (1.93 M in toluene; 16 mL, 31.4 mmol) in CH 2 C1 2 (120 mL) at 0 °C was 

20 added a solution of 2-methoxy-5-(trifluoromethyl)aniline (3.0 g, 15.7 mmol) and 
pyridine (2.3 mL, 47.1 mmol) in CH 2 C1 2 (30 mL) dropwise. The resulting mixture was 
stirred at 0 °C for 30 min and at room temp for 3 h, then concentrated under reduced 
pressure. The residue was diluted with toluene (30 mL), concentrated under reduced 
pressure, and treated with E^O. The resulting precipitate (pyridinium hydrochloride) 

25 was removed and the filtrate was concentrated under redeuced pressure to give the 



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title compound as a yellow oil (3.0 g) which crystallized upon standing at room temp, 
for a few days. 



Step 2. 7V-(2-Methoxy-5-(trifluoromethyl)phenyl)- 7VH4-fluorophenyl)urea: 4- 

Fluoroaniline (0.24 mL, 2.53 mmol) was added to a solution of 2-methoxy-5- 
(trifluoromethyl)phenyl isocyanate (0.50 g, 2.30 mmol) in EtOAc (6 mL) and the 
reaction mixture was stirred at room temp, for 3 d. The resulting precipitate was 
washed with Et 2 0 to give the title compound as a white solid (0.60 g): NMR: 3.94 (s, 
3H). 7.13-7.18 (m, 3H), 7.30 (dd, J=1.5, 8.4 Hz, 1H), 7.44 (m, 2H), 8.45 (s, 1H), 8.52 
(d, J=2.2 Hz, 1H), 9.42 (s, 1H); FAB-MS m/z 329 ((M+l) + ). 

General Method for Urea Formation via Curtius Rearrangement, Followed by 
Trapping with an Amine 



A^-(3-Methoxy-2-naphthyl)-A r -(4-methylphenyl)urea: To a solution of 3-methoxy- 
2-naphthoic acid (Method A6, Step 2; 0.762 g, 3.80 mmol) and Et 3 N (0.588 mL, 4.2 
mmol) in anh toluene (20 mL) at room temp, was added a solution of 
diphenylphosphoryl azide (1.16 g, 4.2 mmol) in toluene (5 mL). The resulting mixture 
was heated to 80 °C for 2 h, cooled to room temp., and /?-toluidine (0.455 g, 4.1 
mmol) was added. The mixture was heated at 80 °C overnight, cooled to room temp., 
quenched with a 10% citric acid solution, and extracted with EtOAc (2 x 25 mL). The 
combined organic layers were washed with a saturated NaCl solution (25 mL), dried 
(MgSOJ, and concentrated in vacuo. The residue was triturated with CH 2 C1 2 to give 



the desired urea as white powder (0.700 g, 61%): mp 171-172 °C; 'H-NMR (DMSO- 
d 6 ) 5 2.22 (s, 3H), 3.99 (s, 3H), 7.07 (d, J=8.49 Hz, 2H), 7.27-7.36 (m, 5H), 7.67-7.72 
(m, 2H), 8.43 (s, 1H), 8.57 (s, 1H), 9.33 (s, 1H); FAB-MS m/z 307 ((M+H) + ). 




CF 3 




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B5. General Method for the Reaction of Substituted Aniline with N,N'- 
Carbonyldiimidazole Followed by Reaction with a Second Amine 

C 

i ii ii 




iV-(5-Chloro-2-hydroxy-4-nitrophenyl)-A r '-(4-(4-pyridinylmethyl)phenyl)urea: A 

5 solution of 4-(4-pyridinylmethyl)aniline (0.300 g, 1.63 mmol) and N,N'- 
carbonyldiimidazole (0.268 g, 1.65 mmol) in CH 2 C1 2 (10 mL) was stirred at room 
temp, for 1 h at which time TLC analysis indicated no starting aniline. The reaction 
mixture was then treated with 2-amino-4-chloro-5-nitrophenol (0.3 1 8 g, 1 .65 mmol) 
and stirred at 40-45 °C for 48 h. The resulting mixture was cooled to room temp, and 

10 diluted with EtOAc (25 mL). The resulting precipitate was separated to give the 
desired product (0.416 g, 64%): TLC (50% acetone/50% CH 2 C1 2 ) 0.40; 'H-NMR 
(DMSO-d 6 ) 8 3.90 (s, 2H), 7.18 (d, J=8.4 Hz, 2H), 7.21 (d, J=6 Hz, 2H), 7.38 (d, 7=8.4 
Hz, 2H), 7.54 (s, 1H), 8.43-8.45 (m, 3H), 8.78 (s, 1H), 9.56 (s, 1H), 11.8 (br s, 1H); 
FAB-MS m/z (rel abundance) 399 ((M+H) + , 10%). 

15 

B6. General Method for the Synthesis of Symmetrical Diphenyl Ureas as Side- 
Products of Urea Forming reactions 




Bis(4-chloro-3-(trifluoromethyl)phenyl)urea: To a solution of 5-arnino-3-tert- 
20 butylisoxazole (0.100 g) in anh toluene (5 mL) was added 4-chloro-3- 
(trifluoromethyl)phenyl isocyanate (0.395 g). The reaction vessel was sealed, heated 
at 85 °C for 24 h, and cooled to room temp. The reaction mixture was added to a 
slurry of Dowex® 50WX2-100 resin (0.5 g) in CH 2 C1 2 (40 mL), and the resulting 
mixture was stirred vigorously for 72 h. The mixture was filtered and the filtrate was 
25 concentrated under reduced pressure. The residue was purified by column 
chromatography (gradient form 100% CH 2 C1 2 to 5% MeOH/95% CH 2 C1 2 ) to give 
bis(4-chloro-3-(trifluoromethyl)phenyl)urea followed by ^-(3-rert-butyl-5- 
isoxazolyl)-7V'-(4-chloro-3-(trifluoromethyl)phenyl)urea. The residue from the 



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symmetrical urea fractions was triturated (Et 2 0/hexane) to give the urea as a white 
solid (0.1 10 g): TLC (3% MeOH/97% CH 2 C1 2 ) R r 0.55; FAB-MS m/z 417 ((M+H) + ). 

B. Combinatorial Method for the Synthesis of Diphenyl Ureas Using 
Triphosgene 

One of the anilines to be coupled was dissolved in dichloroethane (0.10 M). This 
solution was added to an 8 mL vial (0.5 mL) containing dichloroethane (1 mL). To 
this was added a triphosgene solution (0.12 M in dichloroethane, 0.2 mL, 0.4 equiv.), 
followed by diisopropylethylamine (0.35 M in dichloroethane, 0.2 mL, 1.2 equiv.). 
The vial was capped and heated at 80°C for 5 h, then allowed to cool to room temp, 
for approximately 10 h. The second aniline was added (0.10 M in dichloroethane, 0.5 
mL, 1.0 equiv.), followed by diisopropylethylamine (0.35 M in dichloroethane, 0.2 
mL, 1 .2 equiv.). The resulting mixture was heated at 80°C for 4 h, cooled to room 
temperature and treated with MeOH (0.5 mL). The resulting mixture was 
concentrated under reduced pressure and the products were purified by reverse phase 
HPLC. 



C. Urea Interconversions and Misc. Reactions 
CI. General Method for Alkylation of Hydroxyphenyl Ureas 

SCF 3 




Step 1 . 7V-(2-Hy droxy-5-(trifluoromethylthio)pheny IHV'-(4-methylpheny l)urea: 

p-Tolyl isocyanate (0.066 mL, 0.52 mmol) was added to a solution of 2-hydroxy-5- 
(trifluoromethylthio)aniline (0.100 g, 0.48 mmol) in EtOAc (2 mL) and the reaction 
mixture was stirred at room temp, for 2 d. The resulting precipitate was washed with 
EtOAc to provide the title compound (0.13 g): 'H-NMR (CDC1 3 ) 5 2.24 (s, 3H). 7.44- 
7.03 (m, 6H), 8.46 (s, 1H), 8.60 (d, J=1.8 Hz, 1H), 9.16 (s, 1H), 10.41 (s, 1H); FAB- 
MS m/z 343 ((M+l) + ). This material was used in the next step without purification. 



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Step 2.AH2-Methoxy-5-(trifluoromethy^ 

A solution of A r -(2-hydroxy-5-(trifluoromethylthio)phenyl)-A' r -(4-methylphenyl)urea 
(0.125 g, 0.36 mmol), iodomethane (0.045 mL, 0.73 mmol), and K 2 C0 3 (100 mg, 0.73 
mmol) in acetone (2 mL) was heated at the reflux temp, for 6 h, then was cooled to 
room temp, and concentrated under reduced pressure. The residue was dissolved in a 
minimal amount of MeOH, absorbed onto silica gel, and then purified by flash 
chromatograpy (3% Et 2 0/97% CH 2 C1 2 ) to provide the title compound as a white solid 
(68 mg): 'H-NMR (CDC1 3 ) 8 2.22 (s, 3H), 3.92 (s, 3H), 7.05-7.32 (m, 6H), 8.37 (s, 
1H), 8.52 (d, 7=2.2 Hz, 1H), 9.27 (s, 1H); FAB-MS m/z 357 ((M+l) + ). 



C2. General Method for the Reduction of Nitro-Containing Ureas 




A r -(5-^rr-Butyl-2-methoxyphenyl)-A^ , -(2-amino-4-methylphenyl)urea: A solution 
of A^-(5-/er/-butyl-2-methoxyphenyl)-A' r '-(2-nitro-4-methylphenyl)urea (prepared in a 
manner analogous to Method Bla; 4.0 g, 11.2 mmol) in EtOH (100 mL) was added to 
a slurry of 10% Pd/C (0.40 g) in EtOH (10 mL), and the resulting mixture was stirred 
under an atmosphere of H 2 (balloon) at room temp, for 18 h. The mixture was filtered 
through a pad of Celite® and concentrated in vacuo to afford the desired product (3.42 
g, 94%) as a powder: mp 165-166 °C; 'H-NMR (DMSO-d 6 ) 5 1.30 (s, 9H), 2.26 (s, 
3H), 3.50 (br s, 2H), 3.71 (s, 3H), 6.39 (br s, 1H), 6.62 (s, 1H), 6.73 (d, J=8.46 Hz, 
1H), 6.99 (dd, J=2.21, 8.46 Hz, 1H), 7.05 (d, J-8.46 Hz, 1H), 7.29 (s, 1H), 8.22 (d, 
7=2.57 Hz, 1H); FAB-MS m/z 328 ((M+H) + ). 



C3. General Method of Thiourea Formation by Reaction with a 
Thioisocyanate 



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MeO 



AT_(5_^_Butyl-2-methoxyphenyl)-A r -(l-naphthyl)thiourea: To a solution of 5- 
ter^butyl-2-methoxyaniline (0.372 g, 2.07 mmol) in toluene (5 mL) was added 1- 
naphthyl thioisocyanate (0.384 g, 2.07 mmol) and the resulting mixture was allowed 
to stir at room temp, for 8 h to produce a precipitate. The solids were separated and 
sequentially washed with toluene and hexane to give the desired product as an off- 
white pwoder (0.364 g, 48%): mp 158-160 °C; 'H-NMR (DMSO-d 6 ) 6 1.31 (s, 9H), 
3.59 (s, 3H), 6.74 (d, .7=8.46 Hz, 1H), 7.13 (dd, 7=2.21, 8.46 Hz, 1H), 7.53-7.62 (m, 
4H), 7.88-7.95 (m, 4H), 8.06-8.08 (m, 1H), 8.09 (br s, 1H); FAB-MS m/z 365 
((M+H) + ). 

C4. General Method for Deprotection of terf-Butyl Carbonate-Containing 
Ureas 




A^-(5-rerr-Butyl-2-(2-hydroxyethoxy)phenyl)-A r, -(4-methyIphenyl)urea: A solution 
of iV-(5-re^butyl-2-(2-^rr-butoxycarbonyloxy)ethoxy)phenyl)-7V f -(4- 
methylphenyl)urea (Method Blf; 0.237 g, 0.54 mmol) and TFA (0.21 mL, 2.7 mmol) 
in CH 2 C1 2 (2 mL) was stirred at room temp for 1 8 h, then was washed with a saturated 
NaHC0 3 solution (2 mL). The organic layer was dried by passing through IPS filter 
paper (Whatman®) and concentrated under reduced pressure. The resulting white 
foam was triturated (EtjO/hexane), then recrystallized (EtjO) to give the desired 
product (3.7 mg): TLC (50% EtOAc/50% hexane) 0.62; *H-NMR (DMSO-d 6 ) 6 
1.22 (s, 9H), 3.75-3.76 (m, 2H), 4.00-4.03 (m, 2H), 4.80 (t, J=5.0 Hz, 1H), 6.88-6.89 
(m, 4H), 7.06 (d, 7=8.5 Hz, 2H), 7.33 (d, J=SA Hz, 2H), 7.97 (s, 1H), 8.20 br s, 1H), 
9.14 (s, 1H); FAB-MS m/z (rel abundance) 343 ((M+H) + , 100%). 



61 



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The following compounds have been synthesized according to the General Methods 
listed above: 



Table 1. 2-Substituted-5-terf-butylptaenyI Ureas 



5 




62 



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13 



14 





-o-so 



185- 
186 



145- 
147 



A7,Bla 



A7,Bla 



15 



H 



HC1 



0.77 1 50% 378 
(free EtOAc J (M+H)+ 
amine) | 50% pet 
ether 



FAB 



Bla 



16 



H 



-Q-o-Q 



376 

(M+H)- 



FAB 



B5 



Me 



17 



18 



H 



H 



362 

(M+H)+ 



HPLC 
ES-MS 



B5 



10.80 1 50% 

EtOAc 
50% pet 
ether 



405 

y(M+H)+ 



HPLC 
ES-MS 



B5 



19 



H 



Me 



210 



HC1 



0.13 30% 
free EtOAc 
amine) | 70% pet 
ether 



376 

/(M+H)+ 



FAB 



B5 



20 



H 



3.94 



50% 
EtOAc 
50% 
hexane 



362 

y(M+H)+ 



HPLC 
ES-MS 



B5 



21 



H 



-O-o-Q 

Me 



141 



75% 
EtOAc 
25% 
hexane 



376 

/(M+H)+ 



HPLC 
ES-MS 



B5 



22 



H 





114- 10.38 
117 



30% 
EtOAc 
70% 
hexane 



404 

y(M+H)+ 



HPLC 
ES-MS 



A14c, 



23 



H 




346 

(M+H)+ 



HPLC 
ES-MS 



B5 



24 



H 





O-^ /hMe 
N 



3.14 



50% 
EtOAc 
50% 
hexane 



376 



J 



HPLC 
ES-MS 



B5 



25 



26 



Me 

-■6 

Me 



190- 
195 



3.56 



Me 



Me 



Me 



194- 
197 



3.55 



75% 
EtOAc 
25% 
hexane 



455 

y(M+H)+ 



75% 
EtOAc 
25% 
hexane 



HPLC 
ES-MS 



B5 



469 

I (M+H)+ 



HPLC 
ES-MS 



B5 



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Table 2. 



2-Substituted-5-(trifluoromethyl)phenyI Ureas 

CF 3 




Entry 



R 1 



R 2 



mp 

(°C) 



TLC 



Solvent 
System 



Mass 
Spec. 



Synth. 
Source I Method 



27 



OMe 



184- 
185 



401 

(M+H)+ 



FAB 



B2a 



28 



OMe 




231- 
233 



361 

(M+H)+ 



FAB 



Bla 



29 



OMe 




O 




Me 



198 



417 

(M+H)+ 



FAB 



Ble 



30 



OMe 



o 




ci 



206 0.58 



5% 

acetone 

95% 

CH2C12 



437 

(M+H)+ 



FAB 



B2a 



31 



OMe 



-o°-co 



98-99 0.50 



5% 

acetone 

95% 

CH2C12 



B2a 



32 



OMe 



226 0.49 



5% 

acetone 

95% 

CH2C12 



460 

(M+H)+ 



FAB 



B2a 



33 



OMe 




O 




OMe 



190 0.65 



5% 

acetone 

95% 

CH2C12 



B2a 



34 



OMe 




194 0.76 



5% 

acetone 

95% 

CH2C12 



464 

(M+H)+ 



FAB 



B2a 



35 



OMe 



210- I 0.07 
211 



5% 

acetone 

95% 

CH2C12 



402 

(M+H)+ 



FAB 



B2a 



36 



OMe 



202 0.09 



5% 

acetone 

95% 

CH2C12 



420 

(M+H)+ 



FAB 



B2a 



37 



OMe 



215 0.08 



5% 

acetone 

95% 

CH2C12 



420 

(M+H)+ 



FAB 



B2a 



38 



OMe 



-0-<K> 



206 0.05 



5% 

acetone 

95% 

CH2C12 



404 

(M+H)+ 



FAB 



B2a 



64 



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39 



OMe 



Me 



60-62 0.86 



-o-«-o 



5% 
acetone I 
95% 
CH2C12 



433 

(M+H)+ 



FAB 



Bla 



40 



OMe 



Me 



173- I 0.83 
176 



5% 
acetone I 
95% 
CH2C12 



417 

(M+H)+ 



FAB 



Bla 



41 



OMe 




426 

(M+H)+ 



FAB 



B5 



42 



OMe 




198- 
200 



0.75 5% 



431 



FAB 



Me 



acetone \ (M+H)+ 
95% 
CH2C12 



B3b 



43 



OMe 



169- 
171 



0.03 



50% 
EtOAc 
50% 
hexane 



402 

(M+H)+ 



FAB 



B5 



44 



OMe 



CI 



0.18 



5% 

acetone 

95% 

CH2C12 



456 

(M+H)+ 



FAB 



B3b 



45 



OMe 



Me 



161- 
162 



0.73 



5% 

acetone 

95% 

CH2C12 



417 

(M+H)+ 



FAB 



B3b 



46 



OMe 



0.44 



Me 



5% 

acetone 

95% 

CH2C12 



418 

(M+H)+ 



FAB 



B3b 



47 



OMe 



487 

(M+H)+ 



FAB 



F^C 



B3b 



48 



OMe 



CF, 



0.35 



5% 

acetone 

95% 

CH2C12 



472 

(M+H)+ 



FAB 



B3b 



49 



50 



OMe 



0.91 



5% 

acetone 

95% 

CH2C12 



455 

(M+H)+ 



FAB 



OMe 



-Q-K> 



0.78 



5% 

acetone 

95% 

CH2C12 



437 

(M+H)+ 



FAB 



B3b 



B3b 



51 



OMe 



CF 3 



0.82 



5% 

acetone 

95% 

CH2C12 



471 

(M+H)+ 



FAB 



B3b 



52 



OMe 



-<>o-o 



189- I 0.76 
190 



F,C 



5% 

acetone 

95% 

CH2C12 



471 

(M+H)+ 



FAB 



B3b 



65 



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53 



OMe 




O 




^ A 



SMe 



186- 
188 



0.30 



20% 
EtOAc 
80% 
CH2C12 



449 

(M+H)+ 



HPLC 
ES-MS 



B5 



54 



55 



OMe 




0.53 



100% 
EtOAc 



434 

(M+H)+ 



HPLC 
ES-MS 



OMe 



223- I 0.22 
224 




5% 

MeOH 
45% 
EtOAc 
50% pel 
ether 



427 

(M+H)+ 



HPLC 
ES-MS 



B5 



Ble 



56 



57 



OMe 



Me 



202- I 0.21 
204 



5% 

MeOH 
45% 
EtOAc 
50% pel 
ether 



418 

(M+H)+ 



HPLC 
ES-MS 



OMe 




166 0.40 



5% 

MeOH 

95% 

CH2C12 



454 

(M+H)+ 



FAB 



B5 



B5 



58 



OMe 




0.67 



50% 
EtOAc 
50% pel 
ether 



434 

(M+H)+ 



HPLC 
ES-MS 



B5 



59 



OMe 




Me 



b "0 



210- I 0.19 
212 



100% 
EtOAc 



418 

(M+H)+ 



HPLC 
ES-MS 



B5 



60 



OMe 




b -0 



203- 
205 



0.80 



50% 
EtOAc 
50% 
hexane 



404 

(M+H)+ 



HPLC 
ES-MS 



B5 



61 



62 



OMe 



235- 
236 



0.51 



10% 
MeOH 
90% 
CH2C12 



488 

(M+H)+ 



HPLC 
ES-MS 



OMe 



— <^Vo-^^-SMe 



205- 
207 



0.59 



10% 
MeOH 
90% 
CH2C12 



450 

(M+H)+ 



HPLC 
ES-MS 



B5 



B5 



63 



OMe 



-Q-O-Q-Me 



214- 
216 



0.59 



10% 
MeOH 
90% 
CH2C12 



418 

(M+H)+ 



HPLC 
ES-MS 



B5 



64 



65 



OMe 



f \ 





0.56 



10% 
MeOH 
90% 
CH2C12 



422 

(M+H)+ 



HPLC 
ES-MS 



OMe 



209- I 0.63 
211 



10% 
MeOH 
90% 
CH2C12 



B5 



B5 



66 



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66 



OMe 




196- 
198 



0.54 



10% 
MeOH 
90% 
CH2C12 



418 (M+) CI 



B5 



67 



OMe 




0-4 >-OMe 



215- 
217 



0.11 



2% 

MeOH 

98% 

CH2C12 



434 
(M+H> 



FAB 



B5 



68 



OMe 




O 




CI 



226- 
228 



0.13 



2% 

MeOH 

98% 

CH2C12 



438 

(M+H)+ 



FAB 



B5 



69 



OMe 



211- 
213 



0.08 



2% 

MeOH 

98% 

CH2C12 



404 

(M+H)+ 



FAB 



B5 



70 



OMe 




216- 
217 



0.53 



100% 
EtOAc 



488 

(M+H)+ 



HPLC 
ES-MS 



B5 



71 



OMe 




Me /= 
N 




147 0.20 



OMe 



30% 
EtOAc 
70% 
hexane 



446 

(M+H)+ 



HPLC 
ES-MS 



B5 



72 



OMe 



-<>o-Qnh 

o 



215- 
220 



420 

(M+H)+ 



FAB 



B5 



73 



OMe 



OH 



0.14 



50% 
EtOAc 
50% 
hexane 



419 

(M+H)+ 



FAB 



B5 



74 



OMe 



0.07 



50% 
EtOAc 
50% 
hexane 



402 



FAB 



B5 



75 



OMe 




0.08 



50% 
EtOAc 
50% 
hexane 



418 



HPLC 
ES-MS 



B5 



76 



OMe 



165- 
169 



0.05 



50% 
EtOAc 
50% 
hexane 



404 



FAB 



B5 



77 



OMe 



HO 



0.26 



50% 
EtOAc 
50% pe 
ether 



419 

(M+H)+ 



HPLC 
ES-MS 



B5 



78 



OMe 



-O s -Q 



0.20 



50% 

EtOAc h 
50% pe 
ether 



All 

(M+H)+ 



HPLC 
ES-MS 



B5 



79 



OMe 



125- I 0.18 
127 



5% 

MeOH 

95% 

CH2C12 



420 

(M+H)+ 



HPLC 
ES-MS 



B5 



67 



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80 


OMe 




197- 

1 QC 










B5 


81 


H 




142- 
143 


0.30 


100% 
EtOAc 


374 

(M+H)+ 


HPLC 
ES-MS 


B5 


82 


CI 


-0~ oH C N 


149- 
152 


0.48 


100% 
EtOAc 


408 

(M+H)+ 


HPLC 
ES-MS 


B5 


83 


F 


-0-°"C N 


185- 
186 


0.28 


100% 
EtOAc 


392 
1 (M+H)+ 


HPLC 
ES-MS 


B5 



68 



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Table 3. 



2-Substituted»5-(trifluoromethyl)phenyI Ureas 

CF 3 




85 



86 



£1 

CI 



CI 



CI 





OH^ />-Me 
N 




S 
Me 



mp 


TLC 


(°C) 


R f 


199- 


0.66 


201 





Solvent | Mass 
System 1 Sp ec. 

20% 423 
MeOH l\ (M+H)+ 
80% 

CH2C12 _^ 

430 

(M+H)+ 



Synth. 
Source 1 Me thod 

FAB |B5 



FAB 



B5 



422 I FAB 

(M+H)+ 



B5 



87 



CI 




S-\ )"OMe 



454 I FAB 

(M+H)+ 



B5 



88 



CI 



OH 



423 I FAB 

(M+H)+ 



B5 



89 



CI 



422 

(M+H)+ 



FAB 



B5 



90 



91 



92 



93 



94 



95 



96 



CI 





0-\ /^SMe 



CI 



Me 



CI 



168- 
170 



0.30 



0.38 



20% I 453 

EtOAc /| (M+H)+ 
80% 
CH2C12 

100% [422 

EtOAc I (M+H)+ 



209- 
212 



0.24 



CI 



"<IVo-0-OMe 



CI 




CI 




CI 



5% 

MeOH /I 
45% 
EtOAc /I 
50% pet| 
ether 



431 

(M+H)+ 



HPLC ES-I 
MS 



HPLC ES-IB5 
MS 

HPLC ES-lBle 
MS 



0.44 | 50% 

EtOAc /I 
50% pet| 
ether 

0.43 | 50% 

EtOAc /[ 
50% pet| 
ether 



438 

(M+H)+ 



458 

(M+H)+ 



HPLC ES-IB5 
MS 



HPLC ES-|B5 
MS 



0.33 | 50% 

EtOAc /[ 
50% pet| 
ether 



442 

(M+H)+ 



HPLC ES-IB5 
MS 



0.56 | 50% 

EtOAc /[ 
50% petj 
ether 



440 

(M+H)+ 



HPLC ES-IB5 
MS 



69 



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97 



CI 




0.51 I 50% 

EtOAc /I 
50% pet | 
ether 



419 

(M+H)+ 



HPLC ES-IB5 
MS 



98 



CI 



-o-O 



0.24 I 50% 

EtOAc /\ 
50% pet I 
ether 



425 

(M+H)+ 



HPLC ES-IB5 
MS 



99 



CI 



-0°-Q 

HO 



0.35 | 50% 

EtOAc /I 
50% pet] 
ether 



423 

(M+H)+ 



HPLC ES-IB5 
MS 



100 



CI 



169- 
171 



0.14 



100% 
EtOAc 



424 

(M+H)+ 



FAB 



B5 



101 



CI 



— (QhMe 



179- 
180 



0.26 



100% 
EtOAc 



422 

(M+H)+ 



HPLC ES-IB5 
MS 



102 



CI 



181- 

183 



0.22 | 5% 

MeOH /I 
95% 
CH2C12 



408 

(M+H)+ 



FAB 



B5 



103 



CI 




0.27 



70% 
EtOAc 
30% 
hexane 



437 
/I (M+H)+ 



HPLC ES-IB5 
MS 



104 



CI 




118- 
120 



0.17 I 5% 

MeOH /I 
95% 
CH2C12 



458 

(M+H)+ 



HPLC ES-IB5 
MS 



105 



CI 




0.21 | 30% 

EtOAc /I 
70% pet| 
ether 



420 

(M+H)+ 



HPLC ES-IB5 
MS 



106 



107 



CI 



CI 



Me 



bH C N 



172- 
173 



0.17 | 10% 

MeOH /I 
90% 
CH2C12 



422 

(M+H)+ 



FAB 



B5 



184- 
185 



0.11 | 10% 

MeOH /I 
90% 
CH2C12 



408 

(M+H)+ 



FAB 



B5 



108 



CI 



126- 
128 



0.70 I 20% 

MeOH /I 
80% 
CH2C12 



408 

(M+H)+ 



FAB 



B5 



109 



CI 



-0" s -C N 



0.54 



50% 
EtOAc 
50% 
hexane 



424 
/I (M+H)+ 



HPLC ES-IB5 
MS 



110 



CI 



Me Me 



0.11 



50% 
EtOAc 
50% 
hexane 



436 
/I (M+H)+ 



HPLC ES-IB5 
MS 



70 



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111 


CI 


-^Yo^ 


■t a 1 

191- 
193 


A 1 *7 

0.17 


CO/ 

MeOH / 

95% 

CH2C12 








112 


CI 




207- 
209 


0.43 


100% 
EtOAc 


492 

(M+H)+ 


HPLC ES- 
MS 


B5 


113 


CI 






0.28 


100% 
EtOAc 


435 

(M+H)+ 


HPLC ES- 
MS 


B5 


114 


CI 


Ivle 


163- 
166 


A CO 


A AO/ 

40% 

EtOAc / 

60% 

hexane 


(M+H)+ 


MS 


A 1 An Ti ^ 


115 


CI 




one 
207 


u.oy 


J /o 

acetone / 

95% 

CH2C12 


AOA 

(M+H)+ 


1? AT) 




116 


CI 






0.06 


50% 

EtOAc / 

50% 

hexane 


406 


FAB 


B5 


117 


CI 


F 3 C 








4 /o 

(M+H)+ 




DJ 


118 


Br 




115- 
117 


0.28 


100% 
EtOAc 


452 

(M+H)+ 


HPLC ES- 
MS 




119 


F 




171- 
172 


0.31 


100% 
EtOAc 


392 

(M+H)+ 


HPLC ES- 
MS 





71 



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Table 4 



3-Substituted-2-naphthyl Ureas 




Entry 



R 1 



mp 
(°C) 



TLC 



Solvent 
System 



Mass 
Spec. 



Source 



Synth. 
Method 



120 OMe 



238- 
239 



0.25 



25% 
EtOAc 
75% 
hexane 



402 

(M+H)+ 



FAB 



B4 



121 OMe 



199- 
200 



0.20 



25% 
EtOAc 
75% 
hexane 



384 

(M+H)+ 



FAB 



B4 



122 OMe 




^ ^0-\ /J^OMe 



209- 
211 



0.40 



25% 
EtOAc 
75% 
hexane 



414 (M+) EI 



B4 



123 OMe 




O 




401 

(M+H)+ 



FAB 



B5 



OH 



124 OMe 



0.05 



50% 
EtOAc 
50% 
hexane 



384 

(M+H)+ 



FAB 



B5 



125 OMe 




0.86 



50% 
EtOAc 
50% pe 
ether 



415 

(M+H)+ 



HPLC 
ES-MS 



B5 



126 OMe 



-Q _ 

s ~C N 



0.76 



50% 
EtOAc 
50% pe 
ether 



402 

(M+H)+ 



HPLC 
ES-MS 



B5 



127 OMe 



0.39 



50% 
EtOAc 
50% 
hexane 



386 

(M+H)+ 



HPLC 
ES-MS 



B5 



128 OMe 



Me^ 



0.30 



75% 
EtOAc 
25% 
hexane 



400 

(M+H)+ 



HPLC 
ES-MS 



B5 



129 OMe 



Me /= 



130 0.28 



N-\ /-OMe 



30% 
EtOAc 
70% 
hexane 



428 

(M+H)+ 



HPLC 
ES-MS 



B5 



130 OMe 



Me 



0.14 



50% 
EtOAc 
50% 
hexane 



400 

(M+H)+ 



FAB 



B5 



72 



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Table 5. Additional Ureas 



Entry 



Urea 



mp 

(°C) 



TLC 



Solvent 
System 



Mass 
Spec. 



Source 



Synth. 
Method 



131 



CF 3 CF, 
MeO H H OMe 




CI 



0.57 I 5% 

MeOH 
45% 
EtOAc 
50% pet 
ether 



477 

(M+H)+ 



HPLC 
ES-MS 



Ble 



132 



CI 



MeO H H 



0.21 I 5% 

MeOH 
45% 
EtOAc 
50% pet 
ether 



438 

(M+H)+ 



HPLC I Ble 
ES-MS 



133 



134 



135 



136 



H H 



0.34 



100% 
EtOAc 



404 

(M+H)+ 



HPLC 
ES-MS 



Ble 



CI 



CI 



H H 



0.11 I 100% 
EtOAc 



374 

(M+H)+ 



HPLC 
ES-MS 



Ble 



Br 



0.26 



CI 



100% 
EtOAc 



418 

(M+H)+ 



HPLC 
ES-MS 



Ble 



N N 
H H 



O 



CF: 



0.33 



100% 
EtOAc 



390 

(M+H)+ 



HPLC 
ES-MS 



Ble 



N N 
H H 



137 0?N 



MeO H H 



0.26 



100% 
EtOAc 



381 

(M+H)+ 



HPLC I Ble 
ES-MS 



138 



N0 2 



0.13 



100% 
EtOAc 



381 

(M+H)+ 



HPLC I Ble 
ES-MS 



MeO H H 



139 



0 2 N 
CI 



0.42 



100% 
EtOAc 



385 

(M+H)+ 



HPLC I Ble 
ES-MS 



H H 



140 



MeO H H 



0.43 



100% 
EtOAc 



370 

(M+H)+ 



HPLC I Ble 
ES-MS 



141 



CF, 



0.21 



F,C 



H H 



30% 
EtOAc/ 
70% 
pet ether 



420 

(M+H)+ 



HPLC I Ble 
ES-MS 



73 



WO 99/32436 



PCT/US98/26081 



142 


° 2N Til s rTrt 

HO H H 




0.40 


50% 

acetone/ 

50% 

emeu 


399 

(M+H)+ 


FAB 


B5 


143 


H H 


224 


0.87 


5% 

acetone/ 
95% 


465 

(M+H)+ 


FAB 


B6 


144 


O 

H H 




0.10 


50% 
EtOAc/ 
pet ether 


394 

(M+H)+ 


HPLC 
ES-MS 


B5 



BIOLOGICAL EXAMPLES 

In Vitro raf Kinase Assav : 

In an in vitro kinase assay, raf was incubated with MEK in 20 mM Tris-HCl, pH 8.2 
5 containing 2 mM 2-mercaptoethanol and 100 mM NaCl. This protein solution (20 
p.L) was mixed with water (5 \iL) or with compounds diluted with distilled water from 
10 mM stock solutions of compounds dissolved in DMSO. The kinase reaction was 
initiated by adding 25 ^iL [y- 33 P]ATP (1000-3000 dpm/pmol) in 80 mM Tris-HCl, pH 
7.5, 120 mM NaCl, 1.6 mM DTT, 16 mM MgCl 2 . The reaction mixtures were 

10 incubated at 32 °C, usually for 22 min. Incorporation of 33 P into protein was assayed 
by harvesting the reaction onto phosphocellulose mats, washing away free counts with 
a 1% phosphoric acid solution and quantitating phosphorylation by liquid scintillation 
counting. For high throughput screening, 10 jjM ATP and 0.4 j^M MEK was used. In 
some experiments, the kinase reaction was stopped by adding an equal amount of 

15 Laemmli sample buffer. Samples were boiled 3 min and the proteins resolved by 
electrophoresis on 7.5% Laemmli gels. Gels were fixed, dried and exposed to an 
imaging plate (Fuji). Phosphorylation was analyzed using a Fujix Bio-Imaging 
Analyzer System. 

20 All compounds exemplified displayed IC 50 s of between 1 nM and 10 \iM. 
Cellular Assav : 

For in vitro growth assay, human tumor cell lines, including but not limited to 
HCT116 and DLD-1, containing mutated K-ras genes were used in standard 
25 proliferation assays for anchorage dependent growth on plastic or anchorage 

74 



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PCT/US98/26081 



independent growth in soft agar. Human tumor cell lines were obtained from ATCC 
(Rockville MD) and maintained in RPMI with 10% heat inactivated fetal bovine 
serum and 200 mM glutamine. Cell culture media and additives were obtained from 
Gibco/BRL (Gaithersburg, MD) except for fetal bovine serum (JRH Biosciences, 
Lenexa, KS). In a standard proliferation assay for anchorage dependent growth, 3 X 
10 3 cells were seeded into 96-well tissue culture plates and allowed to attach 
overnight at 37 °C in a 5% C0 2 incubator. Compounds were titrated in media in 
dilution series and added to 96-well cell cultures. Cells were allowed to grow 5 days 
typically with a feeding of fresh compound containing media on day three. 
Proliferation was monitored by measuring metabolic activity with standard XTT 
colorimetric assay (Boehringer Mannheim) measured by standard ELISA plate reader 
at OD 490/560, or by measuring 3 H-thymidine incorporation into DNA following an 8 
h culture with 1 |j.Cu 3 H-thymidine, harvesting the cells onto glass fiber mats using a 
cell harvester and measuring 3 H-thymidine incorporation by liquid scintillant 
counting. 

For anchorage independent cell growth, cells were plated at 1 x 10 3 to 3 x 10 3 in 0.4% 
Seaplaque agarose in RPMI complete media, overlaying a bottom layer containing 
only 0.64% agar in RPMI complete media in 24-well tissue culture plates. Complete 
media plus dilution series of compounds were added to wells and incubated at 37 °C 
in a 5% C0 2 incubator for 10-14 days with repeated feedings of fresh media 
containing compound at 3-4 day intervals. Colony formation was monitored and total 
cell mass, average colony size and number of colonies were quantitated using image 
capture technology and image analysis software (Image Pro Plus, media Cybernetics). 

In Vivo Assay : 

An in vivo assay of the inhibitory effect of the compounds on tumors (e.g., solid 
cancers) mediated by raf kinase can be performed as follows: 

CDI nu/nu mice (6-8 weeks old) are injected subcutaneously into the flank at 1 x 10 6 
cells with human colon adenocarcinoma cell line. The mice are dosed i.p., i.v. or p.o. 
at 10, 30, 100, or 300 mg/Kg beginning on approximately day 10, when tumor size is 



75 



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PCT/US98/26081 



between 50-100 mg. Animals are dosed for 14 consecutive days once a day; tumor 
size was monitored with calipers twice a week. 

The inhibitory effect of the compounds on raf kinase and therefore on tumors (e.g., 
solid cancers) mediated by raf kinase can further be demonstrated in vivo according to 
the technique of Monia et al. (Nat. Med. 1996, 2, 668-75). 

The preceding examples can be repeated with similar success by substituting the 
genetically or specifically described reactants and/or operating conditions of this 
invention for those used in the preceding examples. 

From the foregoing description, one skilled in the art can easily ascertain the essential 
characteristics of this invention and, without departing from the spirit and scope 
thereof, can make various changes and modifications of the invention to adapt it to 
various usages and conditions. 



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WHAT IS CLAIMED IS: 



1. A compound of formula I: 



wherein 
A is 




R 3 , R 4 , R 5 and R 6 are each, independently, H, halogen, N0 2 , C M0 - alkyl, optionally 

substituted by halogen up to perhaloalkyl, C^o-alkoxy, optionally 
substituted by halogen up to perhaloalkoxy, aryl, optionally 
substituted by C,. 10 alkyl or Cj_ 10 alkoxy, or C 5 _i 2 hetaryl, 
optionally substituted by Ci_ 10 alkyl or C M0 alkoxy, 

and one of R 3 -R 6 can be -X-Y; 

or two adjacent R 3 -R 6 can together be an aryl or hetaryl ring with 5-12 atoms, 
optionally substituted by C M0 -alkyl, C^o-alkoxy, C 3 . 10 -cycloalkyl, C 2-10 -alkenyl, 
C M0 -alkanoyl, C M2 -aryl, C 5 . 12 -hetaryl; C^-aralkyl, C^-alkaryl, halogen; NR'R 1 ; 

77 



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PCT/US98/26081 



-NO z ; -CF 3 ; -COOR 1 ; -NHCOR 1 ; -CN; -CONR'R 1 ; -S0 2 R 2 ; -SOR 2 ; -SR 2 ; in which R 1 
is H or C,., 0 -alkyl and R 2 is C,. I0 -alkyl, optionally substituted by halogen, up to 
perhalo with -S(0 2 )- optionally incorporated in the aryl or hetaryl ring; 
R 4 ' , R 5 ' and R 6 ' are independently H, halogen, C, - C 10 alkyl, optionally substituted by 

halogen up to perhaloalkyl, 



N 

\ 



or —N - NH 




o 6 



Cj -C 10 alkoxy optionally substituted by halogen up to perhaloalkoxy or - 
X-Y, and either one of R 4 ' , R 5 ' or R 6 ' is -X-Y or two adjacent of R 4 ' , R 5 ' 
and R 6 together are a hetaryl ring with 5-12 atoms optionally substituted 
by C,. 10 alkyl, C,., 0 alkoxy, C 3 _ 10 cycloalkyl, C 2 . 10 alkenyl, C M0 alkanoyl, 
C 6 . 12 aryl, C 5 _ 12 hetaryl or C^ l2 aralkyl; 

R 6 ' is additionally -NHCOR 1 , - NR 1 COR 1 or N0 2 ; 

R 1 is C M0 alkyl optionally substituted by halogen up to perhalo; 

R 3 ' is H, halogen, C } -C l0 alkyl optionally substituted by halogen up to 

perhaloalkyl, C,-C 10 alkoxy, optionally substituted by halogen up to 
perhaloalkoxy; 

X is -CH 2 -, -S-, -N(CH 3 )-, -NHC(O)- ~CH 2 -S-, -S-CH 2 -, -C(O)-, or -O-; and 

X is additionally a single bond where Y is pyridyl; and 

Y is phenyl, pyridyl, naphthyl, pyridone, pyrazine, pyrimidine, 

benzodiaxane, benzopyridine or benzothiazole, each optionally substituted 
by Ci_ 10 -alkyl, C M0 -alkoxy, halogen, OH, -SCH 3 , N0 2 or, where Y is 
phenyl, by 




78 



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PCT/US98/26081 



or a pharmaceutically acceptable salt thereof, 



with the proviso that if X is -O- or -S- , R 
unsubstituted by OH, then R 6 is alkoxy. 



y and R 6 are H, and Y is phenyl 



2. 



A compound according to claim 1, having a pKa greater than 10. 



3. 



A compound according to claim 1 , wherein 



R 3 is halogen or C,., 0 - alkyl, optionally substituted by halogen, up to perhaloalkyl; 
R 4 is H, halogen or N0 2 ; 

R 5 is H, halogen or C ul0 - alkyl; R 6 is H, C M0 - alkoxy, thiophene, pyrole or methyl 
substituted pyrole, 

R 3 ' is H, halogen, CH 3 , or CF 3 and R 6 ' is H, halogen CH 3 , CF 3 or -OCH 3 

4. A compound according to claim 1, wherein 

R 3 is C 4 _i 0 -alkyl, CI, F or CF 3 ; 

R 4 is H, CI, F or N0 2 ; 

R 5 is H, CI, F or CV 10 -alkyl; and 

R 6 is H or OCH 3 . 

5. A compound according to claim 4, wherein R 3 or R 5 is t-butyl. 

6. A compound according to claim 1, wherein X is -CH 2 - , -N(CH 3 )- or - 



NHC(O)-. 



7. 



A compound according to claim 6, wherein Y is phenyl or pyridyl. 



8. 



A compound according to claim 1, wherein X is -O-. 



9. 



A compound according to claim 8, wherein Y is phenyl, pyridyl 



pyridone or benzothiazole. 



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PCT/US98/26081 



10. A compound according to claim 1, wherein X is -S-. 

11. A compound according to claim 10, wherein Y is phenyl or pyridyl. 

12. A compound of the formula 



O 




13. A pharmaceutical composition comprising a compound of claim 1, 
and a physiologically acceptable carrier. 

14. A pharmaceutical composition comprising a compound of claim 12, 
and a physiologically acceptable carrier. 

15. A method for the treatment of a cancerous cell growth mediated by raf 
kinase, comprising administering a compound of formula II: 



O 




II 



wherein 
A is 



R 3 ' 




B is a substituted or unsubstituted, up to tricyclic aryl or heteroaryl moiety 
of up to 30 carbon atoms with at least one 6-member aromatic structure containing 
0-4 members of the group consisting of nitrogen, oxygen and sulfur, wherein if B is 



80 



WO 99/32436 



PCI7US98/26081 



substituted it is substituted by one or more substituents selected from the group 
consisting of halogen, up to per-halo, and W n , wherein n is 0-3 and each W is 
independently selected from the group consisting of -CN, -C0 2 R 7 , -C(0)NR 7 R 7 , 
-C(0)-R 7 , -N0 2 , -OR 7 , - SR 7 , - NR 7 R 7 , -NR 7 C(0)OR\ -NR 7 C(0)R 7 , C r C 10 alkyl, 
C 2 -C 10 alkenyl, C r C 10 alkoxy, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 7 -C 24 alkaryl, C 3 -C 13 
heteroaryl, Q-C^ alkheteroaryl, substituted C r C 10 alkyl, substituted C 2 -C 10 alkenyl, 
substituted C r C 10 alkoxy, substituted C 3 -C 10 cycloalkyl, substituted Q-C^ 

alkheteroaryl and Q-Ar; 

wherein if W is a substituted group, it is substituted by one or more 
substituents independently selected from the group consisting of -CN, -C0 2 R 7 , - 
C(0)R 7 , -C(0)NR 7 R 7 , -OR 7 , -SR 7 , -NR 7 R 7 , N0 2 , -NR 7 C(0)R 7 , -NR 7 C(0)OR 7 and 
halogen up to per-halo; 

wherein each R 7 is independently selected from H, C r C 10 alkyl, C 2 -C 10 
alkenyl, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 3 -C 13 hetaryl, C 7 -C 24 alkaryl, Q-C^ 
alkheteroaryl, up to per-halosubstituted C r C 10 alkyl, up to per-halo substituted C 2 - 
C 10 alkenyl, up to per-halosubstituted C 3 -C 10 cycloalkyl, up to per-halosubstituted 
C 6 -C 14 aryl and up to per-halosubstituted C 3 -C 13 hetaryl, 

wherein Q is - O-, -S-, -N(R 7 )-, -(CH 2 )- m , -C(O)-, -CH(OH)-, -(CH^O-, 
-NR 7 C(0) NR 7 R 7 -, -NR 7 C(0)-, -C(0)NR 7 -, -(CH 2 ) m S-, -(CEyj^R 7 )-, -OCCH^-, 
-CHX a , -CXV, S-iCKJnr and -NCR'XCH^-, 

m = 1-3, and X a is halogen; and 

Ar is a 5-10 member aromatic structure containing 0-2 members of the group 
consisting of nitrogen, oxygen and sulfur, which is unsubstituted or substituted by 
halogen up to per-halo and optionally substituted by Z nl , wherein nl is 0 to 3 and 
each Z is independently selected from the group consisting of of -CN, -C0 2 R 7 , 
-C(0)NR 7 R\ -C(O)- NR\ -N0 2 , -OR 7 , - SR 7 , - NR 7 R 7 , -NR 7 C(0)0R\ -C(0)R 7 , 
-NR 7 C(0)R\ C r C 10 alkyl, C 3 -C 10 cycloalkyl, C 6 -C 14 aryl, C 3 -C 13 hetaryl, Q-C^ 
alkaryl, C4-C23 alkheteroaryl, substituted C r C 10 alkyl, substituted C 3 -C 10 cycloalkyl, 
substituted C 7 -C 24 alkaryl and substituted Q-C^ alkheteroaryl; wherein the one or 
more substituents of Z is selected from the group consisting of -CN, -C0 2 R 7 , 
-C(0)NR 7 R 7 , -OR 7 , -SR 7 , -N0 2 , -NR 7 R 7 , -NR 7 C(0)R 7 and -NR 7 C(0)OR 7 , 



81 



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PCT/US98/26081 



R 4 ' , R s 'and R 6 ' are each independently H, halogen, C M0 -alkyl, optionally substituted 

by halogen up to perhaloalkyl, 



or — NH 



n 

T 

° o 



d -C 10 alkoxy, optionally substituted by halogen up to perhaloalkoxy 
or -X-Y, and 

either one of R 4 ' , R 5 ' or R 6 is -X-Y or two adjacent of R 4 ' , R 5 ' and R 6 ' 
together are a hetaryl ring with 5-12 atoms optionally substituted by C lA0 alkyl, C uxo 
alkoxy, C 3 . 10 cycloalkyl, C 2 _ 10 alkenyl, C M0 alkanoyl, aryl, C 5 . 12 hetaryl or 
ar alkyl; 

R 6 ' is additionally -NHCOR 1 , - NR^OR 1 or N0 2 ; 



R 1 is C M0 alkyl optionally substituted by halogen up to perhalo; 



R 3 ' is independently H, halogen, C M0 alkyl, optionally substituted by halogen up 
to perhaloalkyl, C M0 alkoxy, optionally substituted by halogen up to 
perhaloalkoxy; 



X is -CH 2 -, -S- -N(CH 3 >, -NHC(O)-, -CH 2 -S-, -C(O)-, or -O-; 
X is additionally a single bond where Y is pyridyl; and 

Y is phenyl, pyridyl, naphthyl, pyridone, pyrazine, pyrimidine, benzodioxane, 
benzopyridine or benzothiazole, each optionally substituted by 

C^o-alkyl, C M0 -alkoxy, halogen, OH, -SCH 3 or N0 2 or, where Y is phenyl, by 




a pharmaceutically acceptable salt thereof . 



82 



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PCT/US98/26081 



16. A method according to claim 15, comprising administering a 
compound of formula Ha: 




Ha 



wherein 



A is 



10 



15 



20 




N 



or 



R 



4' 



R 



5* 



R\ R 4 ,R 5 and R 6 are each independently H, halogen, N0 2 , Cj. 10 - alkyl, optionally 
substituted by halogen up to perhaloalkyl, or C M0 -alkoxy, optionally substituted by 
halogen up to perhaloalkoxy, aryl, optionally substituted by C M0 alkyl or C M0 
alkoxy, or C 5 _ I2 hetaryl, optionally substituted by C M0 alkyl or C U10 alkoxy, 

and one of R 3 -R 6 can be -X-Y; 

or two adjacent R 3 -R 6 can together be an aryl or hetaryl ring with 5-12 atoms, 
optionally substituted by C,. 10 -alkyl, C M0 -alkoxy, C 3 . 10 -cycloalkyl, C 2 . 10 -alkenyl, 
C M0 -alkanoyl; C^-aryl, C 5 . 12 -hetaryl, Ce.^-alkaryl, halogen; -NR 1 ^; -N0 2 ; -CF 3 ; 
-COOR 1 ; -NHCOR 1 ; -CN; -CONR 1 ^; -S0 2 R 2 ; -SOR 2 ; -SR 2 ; in which R 1 is H or 

Q.jo-alkyl, optionally substituted by halogen, up to perhalo and R 2 is C^o-alkyl, 
optionally substituted by halogen, up to perhalo, with - S0 2 - optionally incorporated 
in the aryl or hetaryl ring, and R 3 '- R 6 ' are as defined in claim 15. 

17. A method according to claim 16, wherein 
R 3 is halogen or C M0 - alkyl, optionally substituted by halogen, up to perhaloalkyl; 
R 4 is H, halogen or N0 2 ; 



83 



WO 99/32436 



PCT/US98/26081 



R 5 is H, halogen or C M0 - alkyl; 

R 6 is H [or] Ci_j 0 - alkoxy, thiophene, pyrole or methylsubstituted pyrole 
R 3> is H, halogen, CH 3 , or CF 3 and 
R 6 ' is H, halogen, CH 3 , CF 3 or OCH 3 . 

18. A method according to claim 16, wherein X is -CH 2 - , [or] -S-, - 
N(CH 3 )- or -NHC(O)- and Y is phenyl or pyridyl. 

19. A method according to claim 16, wherein X is -O- and Y is phenyl, 
pyridone, pyrimidine, pyridyl or benzothiazole. 



84 



INTERNATIONAL SEARCH REPORT 



International application No. 
PCT/US98/26081 



A. CLASSIFICATION OF SUBJECT MATTER 

IPC(6) :C07C 275/24 C07D 213/02, 333/02; A61K 31/17, 31/38, 31/44 
US CL :514/352, 438, 482; 546/309; 549/29; 564/47 
According to International Patent Classification (IPC) or to both national classification and IPC 

R FIELDS SEARCHED 

Minimum documentation searched (classification system followed by classification symbols) 

U.S. : 514/352, 438, 482; 546/309; 549/29; 564/47 



Documentation searched other than minimum documentation to the extent that such documents are included in the fields searched 
NONE 



Electronic data base consulted during the international search (name of data base and, where practicable, search terms used) 
CAS COMPUTER SEARCH 1966-TO DATE 


C. DOCUMENTS CONSIDERED TO BE RELEVANT 


Category* 


Citation of document, with indication, where appropriate, of the relevant passages 


Relevant to claim No. 


X 
Y 
X 
Y 
X 
Y 


US 5,429,918 A (SETO et al) 04 July 1995, column 4, compound 
(A-14). 

US 5,470,882 A (DIXON et al) 28 November 1995, see entire 
document. 

WO 96/25157 A1(SMITHKLINE BEECHAM CORPORATION) 22 
August 1996, see entire document. 


1-7 
1-7 

1-9, 13 and 14 
1-9, 13 and 14 
1-19 
1-19 


| | Further documents are listed in the continuation of Box C. | | See patent family annex. 


* Special categories of cited documents: "T" later document published after the international filing date or priority 

date and not in conflict with the application but cited to understand 
•A* document defining the general state of the art which is not considered the principle or theory underlying the invention 
to be of particular relevance 

m-nrn i* j , ,- , , , i • - . r-t j . "X" document of particular relevance; the claimed invention cannot be 
"E* earlier document published on or after the international filing date , r . lt _ ' . , . , 

** considered novel or cannot be considered to involve an inventive step 

"L" document which may throw doubts on priority claim(s) or which is wnen document is taken alone 

cited to establish the publication date of another citation or other 

special reason (as specified) *Y" document of particular relevance; the claimed invention cannot be 

considered to involve an inventive step when the document is 
"O" document referring to an oral disclosure, use. exhibition or other combined with one or more other such documents, such combination 
means being obvious to a person skilled in the art 

"P* document published prior to the international tiling date but later than - A - docum ent m em ber of the same patent fam ily 
the priority date claimed 


Date of the actual completion of the international search 
10 MARCH 1999 


Date of mailing of the international search report 

02 APR 1999 


Name and mailing address of the ISA/US 
Commissioner of Patents and Trademarks 
Box PCT 

Washington, D.C. 2023 1 
Facsimile No. (703) 305-3230 


Authorized officer {^\j4L/x) 

ZINNA N. DAVIS ^Tj 
Telephone No. (703) 308-1235 



Form PCT/ISA/210 (second sheet)(July 1992)* 



INTERNATIONAL SEARCH REPORT 



International application No. 
PCT/US98/26081 



Box I Observations where certain claims were found unsearchable (Continuation of item 1 of first sheet) 



This international report has not been established in respect of certain claims under Article 17(2)(a) for the following reasons: 
1. I 1 Claims Nos.: 

' — ' because they relate to subject matter not required to be searched by this Authority, namely: 



2. I I Claims Nos.: 

' — ■ because they relate to parts of the international application that do not comply with the prescribed requirements to such 
an extent that no meaningful international search can be carried out, specifically: 




Claims Nos.: 

because they are dependent claims and are not drafted in accordance with the second and third sentences of Rule 6.4(a). 



Box II Observations where unity of invention is lacking (Continuation of item 2 of first sheet) 



This International Searching Authority found multiple inventions in this international application, as follows: 



Please See Extra Sheet. 




As all required additional search fees were timely paid by the applicant, this international search report covers all searchable 
claims. 




As all searchable claims could be searched without effort justifying an additional fee, this Authority did not invite payment 
of any additional fee. 




As only some of the required additional search fees were timely paid by the applicant, this international search report covers 
only those claims for which fees were paid, specifically claims Nos.: 




No required additional search fees were timely paid by the applicant. Consequently, this international search report is 
restricted to the invention first mentioned in the claims; it is covered by claims Nos.: 



Remark on Protest 




The additional search fees were accompanied by the applicant's protest. 
No protest accompanied the payment of additional search fees. 



Form PCT/ISA/210 (continuation of first sheet(l))(July 1992)* 



INTERNATIONAL SEARCH REPORT 



International application No. 
PCT/US98/26081 



BOX II . OBSERVATIONS WHERE UNITY OF INVENTION WAS LACKING 
This ISA found multiple inventions as follows: 

This application contains the following inventions or groups of inventions which are not so linked as to form a single 
inventive concept under PCT Rule 13.1. In order for all inventions to be searched, the appropriate additional search 
fees must be paid. 

Group I, claim(s)l-14, drawn to phenyl urea substituted compounds and compositions. 
Group II, claim(s) 15-19, drawn to a method of using urea substituted compounds. 

The inventions listed as Groups I and II do not relate to a single inventive concept under PCT Rule 13.1 because, under 
PCT Rule 13.2, they lack the same or corresponding special technical features for the following reasons: 

There is a lack of a significant common structural moiety in the Groups as recited above to which the claimed utility 
may be attributed. The common core in the group is urea. Additionally, the rings systems in the Group II invention 
includes monocyclic, bicyclic and tricyclic systems which are not related as a recognized class of compounds. 

Accordingly, the requirement of the unity of invention has been because there is more than one single inventive concept 
within Groups I and II. 



Form PCT/ISA/210 (extra sheet)(July 1992)*